RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 AJUBAQ96IF1 538 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 HIGD1AQ9Y241 93 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 CCL21O00585 134 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 CRYGBP07316 175 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 GP9P14770 177 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 GRNP28799 593 aaKnown RBP5.95□□□□□ -1.46
TRIM6-201ENST00000278302 ID1P41134 155 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 ZNF672Q499Z4 452 aaPredicted RBP5.95□□□□□ -1.46
TRIM6-201ENST00000278302 C8orf46Q8TAG6 207 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 C17orf77Q96MU5 243 aa5.95□□□□□ -1.46
TRIM6-201ENST00000278302 C8orf49Q96NF6 230 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 MRPL35Q9NZE8 188 aaKnown RBP5.94□□□□□ -1.46
TRIM6-201ENST00000278302 GVINP1Q7Z2Y8 2422 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 LINC01549A6NIU2 74 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 NDUFA3O95167 84 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 PRTN3P24158 256 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 DLX4Q92988 240 aaPredicted RBP5.94□□□□□ -1.46
TRIM6-201ENST00000278302 RASL11BQ9BPW5 248 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 ZNF292O60281 2723 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 ZZEF1O43149 2961 aa5.94□□□□□ -1.46
TRIM6-201ENST00000278302 TEX22C9J3V5 150 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 LY6HO94772 140 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 PTPRZ1P23471 2315 aaPredicted RBP5.93□□□□□ -1.46
TRIM6-201ENST00000278302 PIEZO2Q9H5I5 2752 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 TIMM23O14925 209 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 HOXA3O43365 443 aaPredicted RBP5.93□□□□□ -1.46
TRIM6-201ENST00000278302 DPM2O94777 84 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 IL4P05112 153 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 GATA1P15976 413 aaPredicted RBP5.93□□□□□ -1.46
TRIM6-201ENST00000278302 HES1Q14469 280 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 TWIST1Q15672 202 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 RAB1BQ9H0U4 201 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 ZMAT4Q9H898 229 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 MSRB1Q9NZV6 116 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 TRAV4A0A0B4J268 109 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE12JA6NER3 117 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 M0R3E3 92 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 CRLF1O75462 422 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE7O76087 117 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE12FP0CL80 117 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE12GP0CL81 117 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE12IP0CL82 117 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE4Q13068 117 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 PVRIGQ6DKI7 326 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 ZNF493Q6ZR52 646 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 TIMD4Q96H15 378 aa5.93□□□□□ -1.46
TRIM6-201ENST00000278302 POLEQ07864 2286 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 MALRD1Q5VYJ5 2156 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 APC2O95996 2303 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 FABP5P3A8MUU1 101 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 ATP6V0E2Q8NHE4 81 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 PPDPFLQ8WWR9 84 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 TMEM158Q8WZ71 300 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 RNF5Q99942 180 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 SLC25A39Q9BZJ4 359 aaPredicted RBP5.92□□□□□ -1.46
TRIM6-201ENST00000278302 TNFRSF18Q9Y5U5 241 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 U3KQK5 164 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 SPTBN2O15020 2390 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 ANKRD11Q6UB99 2663 aaPredicted RBP5.92□□□□□ -1.46
TRIM6-201ENST00000278302 TRBV7-3A0A075B6L6 115 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
TRIM6-201ENST00000278302 SRSF1Q07955 248 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRIM6-201ENST00000278302 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 PIFOQ8TCI5 191 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 IGFBPL1Q8WX77 278 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 DPM3Q9P2X0 92 aa5.92□□□□□ -1.46
TRIM6-201ENST00000278302 I3L2K1 104 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 TACC2O95359 2948 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 ZNF688P0C7X2 276 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 HLA-DRB4P13762 266 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 ARL3P36405 182 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 GATD1Q8NB37 220 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 OTORQ9NRC9 128 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 HLA-DRB4X5D2U9 266 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 LY6LH3BQJ8 138 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 NBR2O15453 112 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE2BQ13066 116 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE2EQ4V326 116 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 FAM159AQ6UWV7 190 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 ANKRD29Q8N6D5 301 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 GAGE2DQ9UEU5 116 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 S4R3C0 116 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 Q6ZQT7 251 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 CITED1Q99966 193 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 MAP1LC3AQ9H492 121 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 ATMQ13315 3056 aa5.91□□□□□ -1.46
TRIM6-201ENST00000278302 NCBP2LA6PVI3 153 aaKnown RBP5.9□□□□□ -1.46
TRIM6-201ENST00000278302 TTC32Q5I0X7 151 aa5.9□□□□□ -1.46
TRIM6-201ENST00000278302 TMEM75Q8N9X5 138 aa5.9□□□□□ -1.46
TRIM6-201ENST00000278302 PPDPFQ9H3Y8 114 aa5.9□□□□□ -1.46
TRIM6-201ENST00000278302 A0A087WX48 190 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 RHODO00212 210 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 TCL1BO95988 128 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 EFNA4P52798 201 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 TAL2Q16559 108 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 FBXL19-AS1Q494R0 122 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 LY6G5BQ8NDX9 201 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 TMEM14CQ9P0S9 112 aa5.9□□□□□ -1.47
TRIM6-201ENST00000278302 TRAV8-2A0A0B4J237 113 aa5.89□□□□□ -1.47
TRIM6-201ENST00000278302 IGKV1-17P01599 117 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms