RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 XCL1P47992 114 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 DEFB105AQ8NG35 78 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 ZC2HC1AQ96GY0 325 aa9.42□□□□□ -0.9
SHPRH-201ENST00000275233 SHISA9B4DS77 424 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 C22orf46C9J442 243 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 C9JQL5 133 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 ARTNQ5T4W7 220 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 PRR25Q96S07 402 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 TSSC4Q9Y5U2 329 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-201ENST00000275233 IGHV4-38-2P0DP08 117 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 Q8N8P6 123 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 OVOL2Q9BRP0 275 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 TSC2P49815 1807 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 RLFQ13129 1914 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 PKDREJQ9NTG1 2253 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 HEATR5AQ86XA9 2040 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 IGHV2-5P01817 119 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 IGLV1-44P01699 117 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
SHPRH-201ENST00000275233 ZNF726P1Q15940 193 aa9.41□□□□□ -0.9
SHPRH-201ENST00000275233 CITED2Q99967 270 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-201ENST00000275233 WIPF3A6NGB9 483 aa9.4□□□□□ -0.9
SHPRH-201ENST00000275233 TMEM141Q96I45 108 aa9.4□□□□□ -0.9
SHPRH-201ENST00000275233 DKK4Q9UBT3 224 aa9.4□□□□□ -0.9
SHPRH-201ENST00000275233 ADAMTSL5Q6ZMM2 481 aa9.4□□□□□ -0.9
SHPRH-201ENST00000275233 IGHV4-30-2A0A087WSY4 118 aa9.4□□□□□ -0.9
SHPRH-201ENST00000275233 TAL2Q16559 108 aa9.4□□□□□ -0.9
SHPRH-201ENST00000275233 ESM1Q9NQ30 184 aa9.4□□□□□ -0.9
SHPRH-201ENST00000275233 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.91
SHPRH-201ENST00000275233 ZNF492Q9P255 531 aa9.4□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV4-4A0A075B6R2 117 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 NBL1P41271 181 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 DEFB113Q30KQ7 82 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 VPREB3Q9UKI3 123 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 U3KQE9 123 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 FOXE3Q13461 319 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
SHPRH-201ENST00000275233 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
SHPRH-201ENST00000275233 SLAQ13239 276 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 PIP4P1Q86T03 277 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 ZNF664Q8N3J9 261 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 UBE2BP63146 152 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 CTSZQ9UBR2 303 aa9.39□□□□□ -0.91
SHPRH-201ENST00000275233 VOPP1Q96AW1 172 aa9.38□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV4-61A0A0C4DH41 118 aa9.38□□□□□ -0.91
SHPRH-201ENST00000275233 RSPO1Q2MKA7 263 aaPredicted RBP9.38□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 RPL18AQ02543 176 aaKnown RBP9.37□□□□□ -0.91
SHPRH-201ENST00000275233 RMI2Q96E14 147 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 ABCA1O95477 2261 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 NPYP01303 97 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 DYSFO75923 2080 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 SOCS3O14543 225 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 CRLF1O75462 422 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 LINC00311Q8N616 119 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 RITA1Q96K30 269 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 NDUFA12Q9UI09 145 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 NDUFS5O43920 106 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 ELANEP08246 267 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 HAMPP81172 84 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 FXYD5Q96DB9 178 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
SHPRH-201ENST00000275233 SIGLEC8Q9NYZ4 499 aa9.37□□□□□ -0.91
SHPRH-201ENST00000275233 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 IGLC1P0CG04 106 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 ANAPC1Q9H1A4 1944 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV2-70P01814 119 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 KIF26AQ9ULI4 1882 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-201ENST00000275233 H3BMM0 161 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 CFHR4Q92496 578 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 POLR3KQ9Y2Y1 108 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-201ENST00000275233 IGLV10-54A0A075B6I4 117 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
SHPRH-201ENST00000275233 PLXNA2O75051 1894 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV3-30P01768 117 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 IGHV3-30-5P0DP03 117 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 C1orf147Q96MC9 270 aaPredicted RBP9.35□□□□□ -0.91
SHPRH-201ENST00000275233 V9GYV3 84 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 BLCAPP62952 87 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
SHPRH-201ENST00000275233 hADV29S1A0JD25 119 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 FAM231BA6NCW3 169 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 FGF6P10767 208 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
SHPRH-201ENST00000275233 CRYGCP07315 174 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 SMIM27A0A1W2PRY6 76 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 ZNF491Q8N8L2 437 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 GTF3C1Q12789 2109 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 GP9P14770 177 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms