RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 NDUFB1O75438 58 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 CFHR3Q02985 330 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 MRPL23Q16540 153 aaKnown RBP6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 DUX4L9Q6RFH8 374 aaPredicted RBP6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 PCP2Q8IVA1 136 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 CASP8AP2Q9UKL3 1982 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 MSMBP08118 114 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 C8orf31Q8N9H6 132 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 FAM236AA0A1B0GUQ0 79 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 FAM236BA0A1B0GV22 79 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 CLPSL1A2RUU4 121 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 FAM120AOSQ5T036 256 aa6.9□□□□□ -1.31
SCUBE3-201ENST00000274938 BPESC1Q9GZL8 116 aa6.9□□□□□ -1.31
SCUBE3-201ENST00000274938 BRWD3Q6RI45 1802 aa6.9□□□□□ -1.31
SCUBE3-201ENST00000274938 H3BT86 120 aa6.9□□□□□ -1.31
SCUBE3-201ENST00000274938 E7EQL1 145 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 ANGP03950 147 aaKnown RBP6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 Q6ZS92 163 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 SH2D6Q7Z4S9 175 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 ELANEP08246 267 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 OPRPNQ99935 248 aaPredicted RBP6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 COL11A1P12107 1806 aaPredicted RBP6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 C15orf65H3BRN8 121 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 RALGAPA1Q6GYQ0 2036 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 RNF152Q8N8N0 203 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 C22orf46C9J442 243 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 J3QLI3 93 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 LOXP28300 417 aaPredicted RBP6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 TMEM105Q8N8V8 129 aa6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 PTPRZ1P23471 2315 aaPredicted RBP6.89□□□□□ -1.31
SCUBE3-201ENST00000274938 FOXI1Q12951 378 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 ZFP2Q6ZN57 461 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 HEATR5BQ9P2D3 2071 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 ZNF491Q8N8L2 437 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 VSIG2Q96IQ7 327 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 RP1L1Q8IWN7 2480 aaPredicted RBP6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 TAF1LQ8IZX4 1826 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 TRAV12-2A0A075B6T6 113 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 TRBV10-2A0A0K0K1G8 114 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 ETDCA0A1B0GVM5 59 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 COL11A2P13942 1736 aaPredicted RBP6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 NREPQ16612 68 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 TDRD6O60522 2096 aaKnown RBP6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 TRAV4A0A0B4J268 109 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 G3V318 75 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 MUSTN1Q8IVN3 82 aa6.88□□□□□ -1.31
SCUBE3-201ENST00000274938 UBE2BP63146 152 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 KIAA2026Q5HYC2 2103 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 PDE6GP18545 87 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 RUSC1-AS1Q66K80 236 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 DOCK10Q96BY6 2186 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 AGPAT4-IT1Q9H0P7 198 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 A4D1N5 150 aa6.87□□□□□ -1.31
SCUBE3-201ENST00000274938 RBBP6Q7Z6E9 1792 aaKnown RBP6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 ZNRD1Q9P1U0 126 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 SLX1AQ9BQ83 275 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 TPRP12270 2363 aaKnown RBP6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 GBF1Q92538 1859 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 IGKV3D-7A0A0C4DH55 119 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 ZNF236Q9UL36 1845 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 Q6ZR03 302 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 IGF2BP2-AS1Q96M15 143 aa6.86□□□□□ -1.31
SCUBE3-201ENST00000274938 CGB3P0DN86 165 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 WDR81Q562E7 1941 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 XCL1P47992 114 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 G3V4G9 280 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 KAAG1Q9UBP8 84 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 LHBP01229 141 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 LRRC37AA6NMS7 1700 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 GNLYP22749 145 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 LY6DQ14210 128 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 WDR86Q86TI4 376 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 ICE1Q9Y2F5 2266 aa6.85□□□□□ -1.31
SCUBE3-201ENST00000274938 ASPHD1Q5U4P2 390 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 DEFB105AQ8NG35 78 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 PI4KAP42356 2102 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 CXCL5P42830 114 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 LINC00643Q86TS7 51 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 TPSG1Q9NRR2 321 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 U3KQE9 123 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 UNC13CQ8NB66 2214 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 CGB7P0DN87 165 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 TIMM17AQ99595 171 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 DOCK4Q8N1I0 1966 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 E9PLD3 99 aa6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 DAZ2Q13117 558 aaKnown RBP6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 DAZ4Q86SG3 579 aaKnown RBP6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 DAZ3Q9NR90 486 aaKnown RBP6.84□□□□□ -1.31
SCUBE3-201ENST00000274938 SEC16AO15027 2179 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms