RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MST1LQ2TV78 715 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 TRAV12-2A0A075B6T6 113 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 MESP1Q9BRJ9 268 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 CRLF1O75462 422 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 UBE2E1P51965 193 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 PRO1854Q9UHT4 67 aa6.43□□□□□ -1.38
LIMD1-201ENST00000273317 ACACBO00763 2458 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 C8orf49Q96NF6 230 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 MSRB2Q9Y3D2 182 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 PRSS47A8MTI9 375 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 LTBRP36941 435 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 A0A0G2JNJ9 132 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 NDUFA4O00483 81 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 IGHG3P01860 377 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 Q9UFV3 132 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 H3BRN7 92 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 IGHV1OR15-1A0A075B7D0 117 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 TMEM126AQ9H061 195 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 NDUFA12Q9UI09 145 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 K7EP13 123 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 LINC00311Q8N616 119 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 A0A1B0GUS0 222 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 F8VRH5 84 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 LINC01619G3V211 115 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 IGLC2P0DOY2 106 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 IGLC3P0DOY3 106 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
LIMD1-201ENST00000273317 ACYP1P07311 99 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 APOC4P55056 127 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 PAX9P55771 341 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 Q6ZWC4 215 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 MRPL53Q96EL3 112 aaKnown RBP6.41□□□□□ -1.38
LIMD1-201ENST00000273317 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 ZFYVE26Q68DK2 2539 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 LMO1P25800 156 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 SAA4P35542 130 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 V9GYV3 84 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 KLF5Q13887 457 aaPredicted RBP6.41□□□□□ -1.38
LIMD1-201ENST00000273317 ANXA2RQ3ZCQ2 193 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 C11orf52Q96A22 123 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 IGHV2-70P01814 119 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 RBAKDNA6NC62 111 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 C8orf86Q6ZUL3 223 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 BDP1A6H8Y1 2624 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 K7ERJ3 54 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 IGKV1-16P04430 117 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 CDKN1BP46527 198 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 DAD1P61803 113 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 CARD19Q96LW7 228 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 SIGLEC8Q9NYZ4 499 aa6.41□□□□□ -1.38
LIMD1-201ENST00000273317 TMEM213A2RRL7 107 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 Q0VFX4 171 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 SDHAF1A6NFY7 115 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 H3BUA1 57 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 BVES-AS1Q5T3Y7 98 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 TSSC4Q9Y5U2 329 aaPredicted RBP6.4□□□□□ -1.38
LIMD1-201ENST00000273317 ANKHD1Q8IWZ3 2542 aaKnown RBP6.4□□□□□ -1.38
LIMD1-201ENST00000273317 ETV2O00321 342 aaPredicted RBP6.4□□□□□ -1.38
LIMD1-201ENST00000273317 CD59P13987 128 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 C8orf31Q8N9H6 132 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 J3QLI3 93 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 DKK1O94907 266 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 NUP210LQ5VU65 1888 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 KLHDC3Q9BQ90 382 aa6.4□□□□□ -1.38
LIMD1-201ENST00000273317 GPR179Q6PRD1 2367 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 TCTEX1D4Q5JR98 221 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 SPATA25Q9BR10 227 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 IGHV2-70DA0A0C4DH43 119 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 LTAP01374 205 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 NDUFS5O43920 106 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 GAGE12HA6NDE8 117 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 FGF6P10767 208 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 RNF152Q8N8N0 203 aa6.4□□□□□ -1.39
LIMD1-201ENST00000273317 hADV29S1A0JD25 119 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 J3QQQ9 107 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 ZNF493Q6ZR52 646 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 A0A0U1RQV1 116 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 IGHV2-5P01817 119 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 AZU1P20160 251 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 ANKRD29Q8N6D5 301 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 TMEM105Q8N8V8 129 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 OVOL3O00110 214 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 SHISA9B4DS77 424 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 SETD2Q9BYW2 2564 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-201ENST00000273317 Q6ZRM9 215 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.39□□□□□ -1.39
LIMD1-201ENST00000273317 ASPHD1Q5U4P2 390 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 LINC00527Q9UJ94 153 aa6.39□□□□□ -1.39
LIMD1-201ENST00000273317 DEFB130BP0DP73 79 aa6.38□□□□□ -1.39
LIMD1-201ENST00000273317 DEFB130AP0DP74 79 aa6.38□□□□□ -1.39
LIMD1-201ENST00000273317 MORN5Q5VZ52 161 aa6.38□□□□□ -1.39
LIMD1-201ENST00000273317 PRR25Q96S07 402 aa6.38□□□□□ -1.39
LIMD1-201ENST00000273317 VWC2Q2TAL6 325 aa6.38□□□□□ -1.39
LIMD1-201ENST00000273317 SCRT2Q9NQ03 307 aa6.38□□□□□ -1.39
LIMD1-201ENST00000273317 RBM3P98179 157 aaKnown RBP6.38□□□□□ -1.39
LIMD1-201ENST00000273317 IGKV1-6A0A0C4DH72 117 aa6.38□□□□□ -1.39
LIMD1-201ENST00000273317 EGR2P11161 476 aaPredicted RBP6.38□□□□□ -1.39
LIMD1-201ENST00000273317 SYNJ2BPP57105 145 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms