RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 MAP1BP46821 2468 aaKnown RBP6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 OVOL3O00110 214 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 PIN1P1O15428 100 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 Q6ZS52 159 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 LIME1Q9H400 295 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 COX8CQ7Z4L0 72 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 WFDC6Q9BQY6 131 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 GYPEP15421 78 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 HLA-DMBP28068 263 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 ZNF355PQ9NSJ1 428 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 TRBV7-6A0A0J9YX20 115 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 TMEM158Q8WZ71 300 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 HEATR5BQ9P2D3 2071 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 FHL5Q5TD97 284 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 SLC25A16P16260 332 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 ERCC8Q13216 396 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 RPRMLQ8N4K4 120 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 PLXNA2O75051 1894 aa6.97□□□□□ -1.29
CTDSPL-201ENST00000273179 MYO7BQ6PIF6 2116 aa6.96□□□□□ -1.29
CTDSPL-201ENST00000273179 MRPS12O15235 138 aaKnown RBP6.96□□□□□ -1.29
CTDSPL-201ENST00000273179 IGHV4-34P06331 123 aa6.96□□□□□ -1.29
CTDSPL-201ENST00000273179 CLEC2BQ92478 149 aa6.96□□□□□ -1.29
CTDSPL-201ENST00000273179 TRGV9Q99603 122 aa6.96□□□□□ -1.29
CTDSPL-201ENST00000273179 FOXS1O43638 330 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 EFNA4P52798 201 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 BLCAPP62952 87 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 RSPO1Q2MKA7 263 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 ZNF876PQ49A33 203 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 ODF3Q96PU9 254 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 ATG2AQ2TAZ0 1938 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 C17orf51A8MQB3 221 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 PRO1854Q9UHT4 67 aa6.96□□□□□ -1.3
CTDSPL-201ENST00000273179 TRBV10-2A0A0K0K1G8 114 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 REG3AQ06141 175 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 MLANAQ16655 118 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 ARHGEF17Q96PE2 2063 aaPredicted RBP6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 C15orf62A8K5M9 175 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 WNT9BO14905 357 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 IGLV3-21P80748 117 aaPredicted RBP6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 IGHV3-20A0A0C4DH32 117 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 NDUFS7O75251 213 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 RFPL3SP0C7P2 107 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 NEXN-AS1Q8NBZ9 246 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 TMEM30CPA0ZSE6 113 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 PPYP01298 95 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 RHOHQ15669 191 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 ZNF747Q9BV97 191 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 SRXN1Q9BYN0 137 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 Q9H8V8 135 aa6.95□□□□□ -1.3
CTDSPL-201ENST00000273179 WI2-2373I1.2A0A1W2PRP0 233 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 HIGD1CA8MV81 97 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 K7ENP7 123 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 NANOS3P60323 173 aaKnown RBP6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 RPP25LQ8N5L8 163 aaKnown RBP6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 EXPH5Q8NEV8 1989 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 FAM223AQ8IWN6 122 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 TRAV21A0A0B4J279 112 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 LTAP01374 205 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 LCA10Q71F78 164 aa6.94□□□□□ -1.3
CTDSPL-201ENST00000273179 NDUFA3O95167 84 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 EPPINO95925 133 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 TMEM167BQ9NRX6 74 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 CACNA1IQ9P0X4 2223 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 RPS27P42677 84 aaKnown RBP6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 CFHR3Q02985 330 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 DCTN5Q9BTE1 182 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 PRSS2P07478 247 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 P0DMU3 169 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 FAM231AP0DMU4 169 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 FAM231CP0DMU5 169 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 FAM53AQ6NSI3 398 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 TOMM6Q96B49 74 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 DEFB127Q9H1M4 99 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 BGLAPP02818 100 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 TIMM9Q9Y5J7 89 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 TICRRQ7Z2Z1 1910 aa6.93□□□□□ -1.3
CTDSPL-201ENST00000273179 MRPL33O75394 65 aaKnown RBP6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 IGLV3-19P01714 112 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 WT1P19544 449 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 SUPT4H1P63272 117 aaKnown RBP6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 MKXQ8IYA7 352 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 C1orf158Q8N1D5 194 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 IGHV5-10-1A0A0J9YXX1 117 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 SEC16AO15027 2179 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 GFRA3O60609 400 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 ARL14EPLP0DKL9 152 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 FGF12P61328 243 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 PLGLAQ15195 96 aa6.92□□□□□ -1.3
CTDSPL-201ENST00000273179 ARHGAP5-AS1Q96IT6 56 aa6.91□□□□□ -1.3
CTDSPL-201ENST00000273179 CUL9Q8IWT3 2517 aa6.91□□□□□ -1.3
CTDSPL-201ENST00000273179 CABIN1Q9Y6J0 2220 aa6.91□□□□□ -1.3
CTDSPL-201ENST00000273179 SDIM1Q6ZPB5 146 aa6.91□□□□□ -1.3
CTDSPL-201ENST00000273179 KIAA1549LQ6ZVL6 1849 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms