RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TRGC2P03986 189 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 CT45A10P0DMU9 189 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 RPL19P84098 196 aaKnown RBP18.37■□□□□ 0.53
SSBP4-201ENST00000270061 A8MWL6 223 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 CA1P00915 261 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-201ENST00000270061 CRIP1P50238 77 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 ZFP82Q8N141 532 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 DCANP1Q8TF63 244 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 NDFIP1Q9BT67 221 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 AGPAT4-IT1Q9H0P7 198 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 PEMTQ9UBM1 199 aa18.37■□□□□ 0.53
SSBP4-201ENST00000270061 PHOX2AO14813 284 aa18.36■□□□□ 0.53
SSBP4-201ENST00000270061 ERCC8Q13216 396 aa18.36■□□□□ 0.53
SSBP4-201ENST00000270061 ZNF738Q8NE65 137 aa18.36■□□□□ 0.53
SSBP4-201ENST00000270061 ASCL2Q99929 193 aa18.36■□□□□ 0.53
SSBP4-201ENST00000270061 IZUMO1RA6ND01 250 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 IGLV1-51P01701 117 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 ID1P41134 155 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 GFRA4Q9GZZ7 299 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 FAM231BA6NCW3 169 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 TMEM78Q5T7P6 136 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 Q8TAT8 98 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 NAT8BQ9UHF3 227 aa18.35■□□□□ 0.53
SSBP4-201ENST00000270061 ZNF138P52744 262 aa18.34■□□□□ 0.53
SSBP4-201ENST00000270061 ADAMTSL5Q6ZMM2 481 aa18.34■□□□□ 0.53
SSBP4-201ENST00000270061 LENEPQ9Y5L5 61 aa18.34■□□□□ 0.53
SSBP4-201ENST00000270061 SMUG1Q53HV7 270 aa18.33■□□□□ 0.53
SSBP4-201ENST00000270061 MS4A6AQ9H2W1 248 aa18.33■□□□□ 0.53
SSBP4-201ENST00000270061 TCL1AP56279 114 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 FAM162BQ5T6X4 162 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 LINC00477Q96M19 166 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 NEU1Q99519 415 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 IGKV3-7A0A075B6H7 116 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 COX19Q49B96 90 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 ACTL10Q5JWF8 245 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 NUP35Q8NFH5 326 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 SIGLEC8Q9NYZ4 499 aa18.32■□□□□ 0.52
SSBP4-201ENST00000270061 CSN3P07498 182 aa18.31■□□□□ 0.52
SSBP4-201ENST00000270061 OR2D3Q8NGH3 330 aa18.31■□□□□ 0.52
SSBP4-201ENST00000270061 FOXA3P55318 350 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-201ENST00000270061 OR10J6PQ8NGY7 276 aa18.3■□□□□ 0.52
SSBP4-201ENST00000270061 FRZBQ92765 325 aa18.3■□□□□ 0.52
SSBP4-201ENST00000270061 HIGD1CA8MV81 97 aa18.3■□□□□ 0.52
SSBP4-201ENST00000270061 K7EQG2 157 aa18.3■□□□□ 0.52
SSBP4-201ENST00000270061 SH2D1AO60880 128 aa18.3■□□□□ 0.52
SSBP4-201ENST00000270061 RASL11AQ6T310 242 aa18.3■□□□□ 0.52
SSBP4-201ENST00000270061 GTSF1Q8WW33 167 aa18.29■□□□□ 0.52
SSBP4-201ENST00000270061 GNB1LQ9BYB4 327 aa18.29■□□□□ 0.52
SSBP4-201ENST00000270061 SELENOKQ9Y6D0 94 aa18.29■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BKO60814 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BJP06899 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BOP23527 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BBP33778 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 ZNF80P51504 273 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BDP58876 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BCP62807 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST2H2BEQ16778 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-201ENST00000270061 OR8A1Q8NGG7 326 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BHQ93079 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BNQ99877 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 HIST1H2BMQ99879 126 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 SAV1Q9H4B6 383 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-201ENST00000270061 TRAPPC1Q9Y5R8 145 aa18.28■□□□□ 0.52
SSBP4-201ENST00000270061 FABP5P3A8MUU1 101 aa18.27■□□□□ 0.52
SSBP4-201ENST00000270061 TRGC1P0CF51 173 aa18.27■□□□□ 0.52
SSBP4-201ENST00000270061 WDR73Q6P4I2 378 aa18.27■□□□□ 0.52
SSBP4-201ENST00000270061 TRBV7-9A0A0J9YWB2 115 aa18.27■□□□□ 0.51
SSBP4-201ENST00000270061 S100A6P06703 90 aa18.27■□□□□ 0.51
SSBP4-201ENST00000270061 PAFAH1B2P68402 229 aa18.27■□□□□ 0.51
SSBP4-201ENST00000270061 ATP5L2Q7Z4Y8 100 aa18.27■□□□□ 0.51
SSBP4-201ENST00000270061 WFDC3Q8IUB2 231 aa18.27■□□□□ 0.51
SSBP4-201ENST00000270061 TRAV2A0A0B4J234 112 aa18.26■□□□□ 0.51
SSBP4-201ENST00000270061 NHLRC4P0CG21 123 aaPredicted RBP18.26■□□□□ 0.51
SSBP4-201ENST00000270061 SNRPD3P62318 126 aaKnown RBP18.26■□□□□ 0.51
SSBP4-201ENST00000270061 FABP9Q0Z7S8 132 aa18.26■□□□□ 0.51
SSBP4-201ENST00000270061 RBPMS2Q6ZRY4 209 aaKnown RBP18.26■□□□□ 0.51
SSBP4-201ENST00000270061 MT-ND6P03923 174 aa18.25■□□□□ 0.51
SSBP4-201ENST00000270061 XKRY2A2RUG3 117 aa18.25■□□□□ 0.51
SSBP4-201ENST00000270061 TMEM189A5PLL7 270 aa18.25■□□□□ 0.51
SSBP4-201ENST00000270061 C5orf52A6NGY3 159 aa18.25■□□□□ 0.51
SSBP4-201ENST00000270061 SPINK4O60575 86 aa18.25■□□□□ 0.51
SSBP4-201ENST00000270061 FAM19A4Q96LR4 140 aa18.25■□□□□ 0.51
SSBP4-201ENST00000270061 FRMD6-AS1P0C7T7 363 aa18.24■□□□□ 0.51
SSBP4-201ENST00000270061 ZNF705DP0CH99 300 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-201ENST00000270061 ZNF705BP0CI00 300 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-201ENST00000270061 RPS20P60866 119 aaKnown RBP18.24■□□□□ 0.51
SSBP4-201ENST00000270061 HIST1H1AQ02539 215 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-201ENST00000270061 Q6AWC8 147 aa18.24■□□□□ 0.51
SSBP4-201ENST00000270061 MRPL54Q6P161 138 aaKnown RBP18.24■□□□□ 0.51
SSBP4-201ENST00000270061 TMEM136Q6ZRR5 245 aa18.23■□□□□ 0.51
SSBP4-201ENST00000270061 OR2K2Q8NGT1 345 aa18.23■□□□□ 0.51
SSBP4-201ENST00000270061 DYNLRB2Q8TF09 96 aa18.23■□□□□ 0.51
SSBP4-201ENST00000270061 A0A1B0GXF2 115 aa18.22■□□□□ 0.51
SSBP4-201ENST00000270061 SNURFLB1AK76 121 aa18.22■□□□□ 0.51
SSBP4-201ENST00000270061 TFPI2P48307 235 aa18.22■□□□□ 0.51
SSBP4-201ENST00000270061 GZMBP10144 247 aa18.22■□□□□ 0.51
SSBP4-201ENST00000270061 SNRPEP62304 92 aaKnown RBP18.22■□□□□ 0.51
SSBP4-201ENST00000270061 DEFB114Q30KQ6 69 aa18.22■□□□□ 0.51
SSBP4-201ENST00000270061 Q8N1Y9 231 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms