RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HIST1H1AQ02539 215 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-201ENST00000269318 SELENOKQ9Y6D0 94 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 TLN2Q9Y4G6 2542 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 ORM1P02763 201 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 ZNF493Q6ZR52 646 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 KLHDC1Q8N7A1 406 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 DCANP1Q8TF63 244 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 BORCS7Q96B45 105 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 C11orf21Q9P2W6 132 aa12.56□□□□□ -0.4
CCDC40-201ENST00000269318 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
CCDC40-201ENST00000269318 GPX1P07203 203 aa12.55□□□□□ -0.4
CCDC40-201ENST00000269318 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-201ENST00000269318 SYNJ2BPP57105 145 aa12.55□□□□□ -0.4
CCDC40-201ENST00000269318 DEFB1P60022 68 aa12.55□□□□□ -0.4
CCDC40-201ENST00000269318 Q6ZWC4 215 aa12.55□□□□□ -0.4
CCDC40-201ENST00000269318 FER1L6-AS1Q8NA97 138 aa12.55□□□□□ -0.4
CCDC40-201ENST00000269318 SRD5A1P18405 259 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 OR10J6PQ8NGY7 276 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 SAMD10Q9BYL1 202 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 TCTEX1D4Q5JR98 221 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 PRR9Q5T870 116 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 Q6ZSV7 163 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 C18orf65Q6ZTR6 163 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 FAM19A4Q96LR4 140 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 CNFNQ9BYD5 112 aa12.54□□□□□ -0.4
CCDC40-201ENST00000269318 ZNF324O75467 553 aaPredicted RBP12.53□□□□□ -0.4
CCDC40-201ENST00000269318 ZFAND2AQ8N6M9 145 aa12.53□□□□□ -0.4
CCDC40-201ENST00000269318 OR8A1Q8NGG7 326 aa12.53□□□□□ -0.4
CCDC40-201ENST00000269318 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
CCDC40-201ENST00000269318 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
CCDC40-201ENST00000269318 URB1-AS1Q96HZ7 61 aa12.52□□□□□ -0.4
CCDC40-201ENST00000269318 F6UB75 175 aa12.52□□□□□ -0.41
CCDC40-201ENST00000269318 AMTP48728 403 aa12.52□□□□□ -0.41
CCDC40-201ENST00000269318 Q6ZQT7 251 aa12.52□□□□□ -0.41
CCDC40-201ENST00000269318 MUC21A0A0G2JKD1 596 aa12.51□□□□□ -0.41
CCDC40-201ENST00000269318 MUC21A0A140T8X8 626 aa12.51□□□□□ -0.41
CCDC40-201ENST00000269318 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
CCDC40-201ENST00000269318 ID1P41134 155 aa12.51□□□□□ -0.41
CCDC40-201ENST00000269318 MUC21Q5SSG8 566 aa12.51□□□□□ -0.41
CCDC40-201ENST00000269318 MS4A6AQ9H2W1 248 aa12.51□□□□□ -0.41
CCDC40-201ENST00000269318 TRBV7-9A0A0J9YWB2 115 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 C2orf70A6NJV1 201 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 CD33P20138 364 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 PMCHP20382 165 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 DEFB136Q30KP8 78 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 C4orf3Q8WVX3 66 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 ANK3Q12955 4377 aaKnown RBP12.5□□□□□ -0.41
CCDC40-201ENST00000269318 NTF3P20783 257 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 NIT1Q86X76 327 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 RNF114Q9Y508 228 aa12.5□□□□□ -0.41
CCDC40-201ENST00000269318 SLURP1P55000 103 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 SSTP61278 116 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 FAM104BQ5XKR9 115 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 ADAMTSL5Q6ZMM2 481 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 WFDC3Q8IUB2 231 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 FAM19A2Q8N3H0 131 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 K7EQG2 157 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 TWIST1Q15672 202 aa12.49□□□□□ -0.41
CCDC40-201ENST00000269318 M0QZ24 198 aa12.48□□□□□ -0.41
CCDC40-201ENST00000269318 RNASEKQ6P5S7 137 aaKnown RBP12.48□□□□□ -0.41
CCDC40-201ENST00000269318 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
CCDC40-201ENST00000269318 NAGKQ9UJ70 344 aa12.48□□□□□ -0.41
CCDC40-201ENST00000269318 U3KQK5 164 aa12.48□□□□□ -0.41
CCDC40-201ENST00000269318 LINC01619G3V211 115 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 HSBP1O75506 76 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 SCGB1D1O95968 90 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 MYO9AB2RTY4 2548 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 CUBNO60494 3623 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 OR11H1Q8NG94 326 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 CHCHD1Q96BP2 118 aaKnown RBP12.47□□□□□ -0.41
CCDC40-201ENST00000269318 TMEM191AQ9H0A3 160 aa12.47□□□□□ -0.41
CCDC40-201ENST00000269318 SETXQ7Z333 2677 aaKnown RBP12.46□□□□□ -0.41
CCDC40-201ENST00000269318 TRAV21A0A0B4J279 112 aa12.46□□□□□ -0.41
CCDC40-201ENST00000269318 J3KRW8 73 aa12.46□□□□□ -0.41
CCDC40-201ENST00000269318 TFPI2P48307 235 aa12.46□□□□□ -0.41
CCDC40-201ENST00000269318 ACANP16112 2415 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 LINC00587B1AMM8 73 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 SNAI2O43623 268 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 RNASE1P07998 156 aaKnown RBP12.45□□□□□ -0.42
CCDC40-201ENST00000269318 OR5AL1P0C617 328 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 ZNF688P0C7X2 276 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
CCDC40-201ENST00000269318 OR1N2Q8NGR9 330 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 KLLNB2CW77 178 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 D6R8Y8 96 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 LINC00614P0C842 121 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
CCDC40-201ENST00000269318 FLNBO75369 2602 aaKnown RBP12.44□□□□□ -0.42
CCDC40-201ENST00000269318 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
CCDC40-201ENST00000269318 KHDC1LQ5JSQ8 128 aa12.44□□□□□ -0.42
CCDC40-201ENST00000269318 Q8N976 141 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms