RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 ATRXP46100 2492 aa13.18□□□□□ -0.3
SPG7-201ENST00000268704 A0A1W2PPM0 123 aa13.18□□□□□ -0.3
SPG7-201ENST00000268704 TMEM190Q8WZ59 177 aa13.18□□□□□ -0.3
SPG7-201ENST00000268704 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
SPG7-201ENST00000268704 C11orf21Q9P2W6 132 aa13.18□□□□□ -0.3
SPG7-201ENST00000268704 FABP5P3A8MUU1 101 aa13.17□□□□□ -0.3
SPG7-201ENST00000268704 DTX2Q86UW9 622 aa13.17□□□□□ -0.3
SPG7-201ENST00000268704 SIVA1O15304 175 aa13.17□□□□□ -0.3
SPG7-201ENST00000268704 ECSCRQ19T08 205 aa13.17□□□□□ -0.3
SPG7-201ENST00000268704 VMO1Q7Z5L0 202 aa13.17□□□□□ -0.3
SPG7-201ENST00000268704 IGHV7-81A0A0B4J1V7 117 aa13.16□□□□□ -0.3
SPG7-201ENST00000268704 FOXC1Q12948 553 aa13.16□□□□□ -0.3
SPG7-201ENST00000268704 IGKV3D-20A0A0C4DH25 116 aa13.16□□□□□ -0.3
SPG7-201ENST00000268704 FCER1GP30273 86 aa13.16□□□□□ -0.3
SPG7-201ENST00000268704 C15orf32Q32M92 178 aa13.16□□□□□ -0.3
SPG7-201ENST00000268704 PRTN3P24158 256 aa13.16□□□□□ -0.3
SPG7-201ENST00000268704 CHAC1Q9BUX1 264 aa13.15□□□□□ -0.3
SPG7-201ENST00000268704 CNFNQ9BYD5 112 aa13.15□□□□□ -0.3
SPG7-201ENST00000268704 ZC2HC1BQ5TFG8 222 aa13.15□□□□□ -0.3
SPG7-201ENST00000268704 AGRNO00468 2067 aa13.15□□□□□ -0.3
SPG7-201ENST00000268704 TMEM8BA6NDV4 472 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 IGKCP01834 107 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 CLEC3BP05452 202 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 NPFFR1Q9GZQ6 430 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 TMEM160Q9NX00 188 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 COL12A1Q99715 3063 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 VPS13CQ709C8 3753 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 NCOR2Q9Y618 2525 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 Q8N6K4 173 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 VKORC1Q9BQB6 163 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 SPRY2O43597 315 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 SAMD5Q5TGI4 173 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
SPG7-201ENST00000268704 TSSC4Q9Y5U2 329 aaPredicted RBP13.14□□□□□ -0.31
SPG7-201ENST00000268704 TRBV25-1A0A075B6N4 114 aa13.13□□□□□ -0.31
SPG7-201ENST00000268704 TRAV40A0A0B4J280 105 aa13.13□□□□□ -0.31
SPG7-201ENST00000268704 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.13□□□□□ -0.31
SPG7-201ENST00000268704 LINC01559Q495D7 138 aa13.13□□□□□ -0.31
SPG7-201ENST00000268704 AGPAT4-IT1Q9H0P7 198 aa13.13□□□□□ -0.31
SPG7-201ENST00000268704 NXT2Q9NPJ8 142 aaKnown RBP13.13□□□□□ -0.31
SPG7-201ENST00000268704 BUB3O43684 328 aa13.13□□□□□ -0.31
SPG7-201ENST00000268704 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
SPG7-201ENST00000268704 ZFAND3Q9H8U3 227 aa13.13□□□□□ -0.31
SPG7-201ENST00000268704 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
SPG7-201ENST00000268704 NHP2Q9NX24 153 aaKnown RBP13.12□□□□□ -0.31
SPG7-201ENST00000268704 MRPL35Q9NZE8 188 aaKnown RBP13.12□□□□□ -0.31
SPG7-201ENST00000268704 LINC01548A6NM66 108 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 M0R1W7 72 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 FABP2P12104 132 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 Q8N9W7 124 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 MSRB2Q9Y3D2 182 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 COL6A6A6NMZ7 2263 aa13.12□□□□□ -0.31
SPG7-201ENST00000268704 IGLV2-18A0A075B6J9 118 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 G3V318 75 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 SMIM17P0DL12 118 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 EFNA4P52798 201 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 CLPSL1A2RUU4 121 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 J3KRW8 73 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 MAPKAPK5-AS1Q8N8E1 139 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 ATP6V0E1O15342 81 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 ZNF502Q8TBZ5 544 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 IGF2RP11717 2491 aa13.11□□□□□ -0.31
SPG7-201ENST00000268704 CCL21O00585 134 aa13.1□□□□□ -0.31
SPG7-201ENST00000268704 DPM2O94777 84 aa13.1□□□□□ -0.31
SPG7-201ENST00000268704 Q8N8P6 123 aa13.1□□□□□ -0.31
SPG7-201ENST00000268704 CCDC140Q96MF4 163 aa13.1□□□□□ -0.31
SPG7-201ENST00000268704 CACNA1AO00555 2505 aa13.1□□□□□ -0.31
SPG7-201ENST00000268704 IGHV7-4-1A0A0J9YVY3 117 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 CCDC144NLQ6NUI1 221 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 TRAV8-2A0A0B4J237 113 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
SPG7-201ENST00000268704 AMTNQ6UX39 209 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 ATP5G2Q06055 141 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 WFDC2Q14508 124 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 NRACQ8N912 160 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 OR5A1Q8NGJ0 315 aa13.09□□□□□ -0.31
SPG7-201ENST00000268704 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
SPG7-201ENST00000268704 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
SPG7-201ENST00000268704 KLK15Q9H2R5 256 aa13.08□□□□□ -0.32
SPG7-201ENST00000268704 IGF1P05019 195 aa13.08□□□□□ -0.32
SPG7-201ENST00000268704 PIFOQ8TCI5 191 aa13.08□□□□□ -0.32
SPG7-201ENST00000268704 INSL3P51460 131 aa13.07□□□□□ -0.32
SPG7-201ENST00000268704 H3BVH4 76 aa13.07□□□□□ -0.32
SPG7-201ENST00000268704 PRR9Q5T870 116 aa13.07□□□□□ -0.32
SPG7-201ENST00000268704 HIGD1BQ9P298 99 aa13.07□□□□□ -0.32
SPG7-201ENST00000268704 RAB9AP51151 201 aa13.07□□□□□ -0.32
SPG7-201ENST00000268704 TMEM78Q5T7P6 136 aa13.07□□□□□ -0.32
SPG7-201ENST00000268704 CEND1Q8N111 149 aa13.07□□□□□ -0.32
SPG7-201ENST00000268704 DEFB1P60022 68 aa13.06□□□□□ -0.32
SPG7-201ENST00000268704 EBI3Q14213 229 aa13.06□□□□□ -0.32
SPG7-201ENST00000268704 LAGE3Q14657 143 aa13.06□□□□□ -0.32
SPG7-201ENST00000268704 ETDBQ3ZM63 59 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms