RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PRTN3P24158 256 aa12.96□□□□□ -0.33
SQLE-201ENST00000265896 ZC2HC1BQ5TFG8 222 aa12.96□□□□□ -0.33
SQLE-201ENST00000265896 Q6AWC8 147 aa12.96□□□□□ -0.33
SQLE-201ENST00000265896 LY6G5BQ8NDX9 201 aa12.96□□□□□ -0.33
SQLE-201ENST00000265896 SFTA2Q6UW10 78 aa12.96□□□□□ -0.34
SQLE-201ENST00000265896 NPBQ8NG41 125 aa12.96□□□□□ -0.34
SQLE-201ENST00000265896 SETD2Q9BYW2 2564 aaPredicted RBP12.96□□□□□ -0.34
SQLE-201ENST00000265896 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 RPL11P62913 178 aaKnown RBP12.95□□□□□ -0.34
SQLE-201ENST00000265896 LGALS9BQ3B8N2 356 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 LGALS9CQ6DKI2 356 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 OR2K2Q8NGT1 345 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 MSRB2Q9Y3D2 182 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 H3BVH4 76 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 GOSR1O95249 250 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 PDE6HQ13956 83 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
SQLE-201ENST00000265896 TMEM8BA6NDV4 472 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 M0R381 172 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 SRD5A1P18405 259 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 PAX8Q06710 450 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 Q8N9W7 124 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 NHP2Q9NX24 153 aaKnown RBP12.94□□□□□ -0.34
SQLE-201ENST00000265896 SPCS1Q9Y6A9 102 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 U3KQK5 164 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 BMI1P35226 326 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 RPL24P83731 157 aaKnown RBP12.94□□□□□ -0.34
SQLE-201ENST00000265896 TTC9CQ8N5M4 171 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 HIF1ANQ9NWT6 349 aa12.94□□□□□ -0.34
SQLE-201ENST00000265896 PAX2Q02962 417 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 COTL1Q14019 142 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 MRPL35Q9NZE8 188 aaKnown RBP12.93□□□□□ -0.34
SQLE-201ENST00000265896 MYO18BQ8IUG5 2567 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 A0A1B0GW15 77 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 C9orf118A6NHY6 69 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 ODF3BA8MYP8 253 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 NEGR1Q7Z3B1 354 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 RNF5Q99942 180 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 UBTD1Q9HAC8 227 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 CFAP46Q8IYW2 2715 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 ZFYVE26Q68DK2 2539 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 TRBV6-1A0A0K0K1D8 114 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 F6UB75 175 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 SAA4P35542 130 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 ADORA2A-AS1P86434 159 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
SQLE-201ENST00000265896 TLN2Q9Y4G6 2542 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 A6NDN8 102 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 BUB3O43684 328 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 ODF1Q14990 250 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 PRR9Q5T870 116 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 SPANXN1Q5VSR9 72 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 MAPKAPK5-AS1Q8N8E1 139 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 TRBV12-3P01733 135 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
SQLE-201ENST00000265896 SEC11AP67812 179 aa12.91□□□□□ -0.34
SQLE-201ENST00000265896 RAXQ9Y2V3 346 aa12.91□□□□□ -0.34
SQLE-201ENST00000265896 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
SQLE-201ENST00000265896 EMP1P54849 157 aa12.91□□□□□ -0.34
SQLE-201ENST00000265896 AMTNQ6UX39 209 aa12.91□□□□□ -0.34
SQLE-201ENST00000265896 HHLA3Q9XRX5 114 aa12.91□□□□□ -0.34
SQLE-201ENST00000265896 HSD52Q0P140 79 aa12.9□□□□□ -0.34
SQLE-201ENST00000265896 CLPSL1A2RUU4 121 aa12.9□□□□□ -0.34
SQLE-201ENST00000265896 USP9XQ93008 2570 aaPredicted RBP12.9□□□□□ -0.34
SQLE-201ENST00000265896 LY6EQ16553 131 aa12.9□□□□□ -0.35
SQLE-201ENST00000265896 GATD1Q8NB37 220 aa12.9□□□□□ -0.35
SQLE-201ENST00000265896 CHAC1Q9BUX1 264 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 FAM208BQ5VWN6 2430 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 TRAV8-2A0A0B4J237 113 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 K7ENP7 123 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 IGKCP01834 107 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 TMEM78Q5T7P6 136 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 C8orf86Q6ZUL3 223 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 ZFAND3Q9H8U3 227 aa12.89□□□□□ -0.35
SQLE-201ENST00000265896 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 TRBV25-1A0A075B6N4 114 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 H3BRM9 83 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 K7ERU9 68 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 ZNF502Q8TBZ5 544 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 SRSF8Q9BRL6 282 aaKnown RBP12.88□□□□□ -0.35
SQLE-201ENST00000265896 BPESC1Q9GZL8 116 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 UNQ9165/PRO28630Q6UXU0 137 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 GTF2H5Q6ZYL4 71 aa12.88□□□□□ -0.35
SQLE-201ENST00000265896 RPL39LQ96EH5 51 aaKnown RBP12.88□□□□□ -0.35
SQLE-201ENST00000265896 A0A1W2PPM0 123 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 CCDC144NLQ6NUI1 221 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 K7EP34 96 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 MGPP08493 103 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 UFSP1Q6NVU6 142 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 C14orf178Q8N769 122 aaPredicted RBP12.87□□□□□ -0.35
SQLE-201ENST00000265896 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 EDN2P20800 178 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 S100A7AQ86SG5 101 aa12.87□□□□□ -0.35
SQLE-201ENST00000265896 Q8N6K4 173 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms