RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
SSBP1-201ENST00000265304 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
SSBP1-201ENST00000265304 DEFB135Q30KP9 77 aa10.34□□□□□ -0.75
SSBP1-201ENST00000265304 Q8TAT8 98 aa10.34□□□□□ -0.75
SSBP1-201ENST00000265304 PCNPQ8WW12 178 aaKnown RBP10.34□□□□□ -0.75
SSBP1-201ENST00000265304 ASCL2Q99929 193 aa10.34□□□□□ -0.75
SSBP1-201ENST00000265304 X6R8D5 127 aa10.34□□□□□ -0.75
SSBP1-201ENST00000265304 TRAV34A0A0B4J273 112 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 C7orf71A4D174 169 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 INSP01308 110 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 FXYD7P58549 80 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 PRR9Q5T870 116 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 Q86TA4 180 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 SMIM12Q96EX1 92 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 TREM1Q9NP99 234 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 RPH3ALQ9UNE2 315 aa10.33□□□□□ -0.76
SSBP1-201ENST00000265304 RAB19A4D1S5 217 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 H7BYZ3 331 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 GPX1P07203 203 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
SSBP1-201ENST00000265304 AKR1C3P42330 323 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
SSBP1-201ENST00000265304 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 TOR2AQ5JU69 321 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 TMEM183AQ8IXX5 376 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 GOLT1BQ9Y3E0 138 aa10.32□□□□□ -0.76
SSBP1-201ENST00000265304 TRAV12-2A0A075B6T6 113 aa10.31□□□□□ -0.76
SSBP1-201ENST00000265304 PRNTQ86SH4 94 aa10.31□□□□□ -0.76
SSBP1-201ENST00000265304 OR11H2Q8NH07 326 aa10.31□□□□□ -0.76
SSBP1-201ENST00000265304 SGK494Q96LW2 274 aa10.31□□□□□ -0.76
SSBP1-201ENST00000265304 PYGO2Q9BRQ0 406 aa10.31□□□□□ -0.76
SSBP1-201ENST00000265304 DERL1Q9BUN8 251 aa10.31□□□□□ -0.76
SSBP1-201ENST00000265304 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
SSBP1-201ENST00000265304 TP53TG3Q9ULZ0 132 aa10.31□□□□□ -0.76
SSBP1-201ENST00000265304 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
SSBP1-201ENST00000265304 C9JCJ5 164 aa10.3□□□□□ -0.76
SSBP1-201ENST00000265304 IGLV2-8P01709 118 aa10.3□□□□□ -0.76
SSBP1-201ENST00000265304 MIFP14174 115 aa10.3□□□□□ -0.76
SSBP1-201ENST00000265304 UBE2G1P62253 170 aa10.3□□□□□ -0.76
SSBP1-201ENST00000265304 SMUG1Q53HV7 270 aa10.3□□□□□ -0.76
SSBP1-201ENST00000265304 EIF4E3Q8N5X7 224 aaKnown RBP10.3□□□□□ -0.76
SSBP1-201ENST00000265304 Q8NAQ8 132 aa10.3□□□□□ -0.76
SSBP1-201ENST00000265304 TRAV12-3A0A0B4J271 114 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 C9JQL5 133 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 RNASE4P34096 147 aaKnown RBP10.29□□□□□ -0.76
SSBP1-201ENST00000265304 CRIP1P50238 77 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
SSBP1-201ENST00000265304 BTN1A1Q13410 526 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 PEA15Q15121 130 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 ZNF674Q2M3X9 581 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 ANXA2RQ3ZCQ2 193 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 BAGE2Q86Y30 109 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 NIPSNAP3BQ9BS92 247 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 C11orf68Q9H3H3 251 aaKnown RBP10.29□□□□□ -0.76
SSBP1-201ENST00000265304 RETNQ9HD89 108 aa10.29□□□□□ -0.76
SSBP1-201ENST00000265304 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
SSBP1-201ENST00000265304 LINC00862A6NCI5 91 aa10.28□□□□□ -0.76
SSBP1-201ENST00000265304 PFN1P07737 140 aaKnown RBP10.28□□□□□ -0.76
SSBP1-201ENST00000265304 SRSF3P84103 164 aaKnown RBP10.28□□□□□ -0.76
SSBP1-201ENST00000265304 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
SSBP1-201ENST00000265304 ZNF575Q86XF7 245 aa10.28□□□□□ -0.76
SSBP1-201ENST00000265304 ZC2HC1AQ96GY0 325 aa10.28□□□□□ -0.76
SSBP1-201ENST00000265304 PARLQ9H300 379 aa10.28□□□□□ -0.76
SSBP1-201ENST00000265304 LY96Q9Y6Y9 160 aa10.28□□□□□ -0.76
SSBP1-201ENST00000265304 MUC4Q99102 2169 aa10.27□□□□□ -0.77
SSBP1-201ENST00000265304 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
SSBP1-201ENST00000265304 GCGP01275 180 aa10.27□□□□□ -0.77
SSBP1-201ENST00000265304 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
SSBP1-201ENST00000265304 Q6ZQT7 251 aa10.27□□□□□ -0.77
SSBP1-201ENST00000265304 EDA2RQ9HAV5 297 aa10.27□□□□□ -0.77
SSBP1-201ENST00000265304 U3KQK5 164 aa10.27□□□□□ -0.77
SSBP1-201ENST00000265304 IGHV1OR15-1A0A075B7D0 117 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 TMEM189A5PLL7 270 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 CENPWQ5EE01 88 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 DNLZQ5SXM8 178 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 UQCC3Q6UW78 93 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 RNASE8Q8TDE3 154 aaKnown RBP10.26□□□□□ -0.77
SSBP1-201ENST00000265304 LINC01587Q99440 93 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 C11orf21Q9P2W6 132 aa10.26□□□□□ -0.77
SSBP1-201ENST00000265304 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
SSBP1-201ENST00000265304 AZU1P20160 251 aa10.25□□□□□ -0.77
SSBP1-201ENST00000265304 GNG4P50150 75 aa10.25□□□□□ -0.77
SSBP1-201ENST00000265304 RRN3P1Q2M238 152 aa10.25□□□□□ -0.77
SSBP1-201ENST00000265304 IBA57Q5T440 356 aaKnown RBP10.25□□□□□ -0.77
SSBP1-201ENST00000265304 FAM162BQ5T6X4 162 aa10.25□□□□□ -0.77
SSBP1-201ENST00000265304 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
SSBP1-201ENST00000265304 DNAH7Q8WXX0 4024 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 C19orf71A6NCJ1 209 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 J3KRW8 73 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 IL17DQ8TAD2 202 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 OCC1Q8TAD7 63 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 KCNS1Q96KK3 526 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 TMEM208Q9BTX3 173 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 BIN3Q9NQY0 253 aa10.24□□□□□ -0.77
SSBP1-201ENST00000265304 IGKV3D-20A0A0C4DH25 116 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms