RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 FAM90A16PA6NEW6 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A20PA6NIJ5 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A8PA6NJQ4 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A7PA6NKC0 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A22PA8MWA6 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A12PA8MX19 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A5PA8MXJ8 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A23PA8MXZ1 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 CRLF1O75462 422 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A15PP0C7V4 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A13PP0C7W8 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A14PP0C7W9 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A24PP0C7X0 464 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 LEAP2Q969E1 77 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 FAM215AQ9Y5M1 114 aa6.7□□□□□ -1.34
LDB3-201ENST00000263066 COX6CP09669 75 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 LINC00305Q7Z4B0 112 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 TRGV11A0A075B6L2 103 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 TRAV12-3A0A0B4J271 114 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 Q8NA96 180 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 SLC25A2Q9BXI2 301 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 MAST4O15021 2626 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 TACC2O95359 2948 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 A0A0U1RQV1 116 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 H3BMM0 161 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 NPYP01303 97 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 LYZP61626 148 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 FAM53AQ6NSI3 398 aaPredicted RBP6.69□□□□□ -1.34
LDB3-201ENST00000263066 ZNRF1Q8ND25 227 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 UBE2WQ96B02 151 aa6.69□□□□□ -1.34
LDB3-201ENST00000263066 MRPL35Q9NZE8 188 aaKnown RBP6.69□□□□□ -1.34
LDB3-201ENST00000263066 FLNCQ14315 2725 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 MLANAQ16655 118 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 SLC25A48Q6ZT89 311 aaKnown RBP6.68□□□□□ -1.34
LDB3-201ENST00000263066 IGHV3-72A0A0B4J1Y9 119 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 NDUFA7O95182 113 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 MYOD1P15172 320 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 HCFC1P51610 2035 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 TRAV3A0A0B4J244 114 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 FAM231DQ6ZW35 169 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 TMEM158Q8WZ71 300 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
LDB3-201ENST00000263066 ASH1LQ9NR48 2969 aaKnown RBP6.68□□□□□ -1.34
LDB3-201ENST00000263066 ANKRD17O75179 2603 aaKnown RBP6.68□□□□□ -1.34
LDB3-201ENST00000263066 TMEM213A2RRL7 107 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 J3QKU1 62 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 NHLRC4P0CG21 123 aaPredicted RBP6.67□□□□□ -1.34
LDB3-201ENST00000263066 TRAV41A0A0B4J266 112 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 ZNF503-AS2A6NEH8 195 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 SUB1P53999 127 aaKnown RBP eCLIP6.67□□□□□ -1.34
LDB3-201ENST00000263066 TMEM42Q69YG0 159 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 IGSF10Q6WRI0 2623 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 TCL1BO95988 128 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 Q6ZPA2 131 aa6.67□□□□□ -1.34
LDB3-201ENST00000263066 MRPL32Q9BYC8 188 aaKnown RBP6.67□□□□□ -1.34
LDB3-201ENST00000263066 C12orf77C9JDV5 145 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 RPL39P5Q59GN2 51 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 BBC3Q96PG8 261 aaPredicted RBP6.66□□□□□ -1.34
LDB3-201ENST00000263066 DCTN5Q9BTE1 182 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 IFI27L2Q9H2X8 130 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 LINC00527Q9UJ94 153 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 V9GYY9 64 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 AKAP9Q99996 3911 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 NDUFB3O43676 98 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 IGLV2-8P01709 118 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 TAL2Q16559 108 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 CCL19Q99731 98 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 IGHV1-18A0A0C4DH31 117 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 FAM90A9PA6NNJ1 464 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 SRD5A1P18405 259 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 TRPT1Q86TN4 253 aaKnown RBP6.66□□□□□ -1.34
LDB3-201ENST00000263066 ZNF329Q86UD4 541 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 DUX3Q96PT4 197 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 TNCP24821 2201 aa6.66□□□□□ -1.34
LDB3-201ENST00000263066 TEX49A0A1B0GTD5 131 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 NPIPB13A6NJU9 1138 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 NPIPB4C9JG80 1138 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 LYZL1Q6UWQ5 148 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 Q8N1Y9 231 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 RNASE6Q93091 150 aaKnown RBP6.65□□□□□ -1.34
LDB3-201ENST00000263066 FMC1Q96HJ9 113 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 CARD19Q96LW7 228 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 Q9H3A6 140 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 PRNDQ9UKY0 176 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 C2CD3Q4AC94 2353 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 SORL1Q92673 2214 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 LINC00473A8K010 186 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 MBD6Q96DN6 1003 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.34
LDB3-201ENST00000263066 DSCAMO60469 2012 aa6.65□□□□□ -1.35
LDB3-201ENST00000263066 DUSP14O95147 198 aaKnown RBP6.65□□□□□ -1.35
LDB3-201ENST00000263066 FHL3Q13643 280 aa6.65□□□□□ -1.35
LDB3-201ENST00000263066 ATXN8Q156A1 80 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms