RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 Q6ZUT4 128 aa11.67□□□□□ -0.54
XRCC1-201ENST00000262887 BUB1B-PAK6H3BSN5 160 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
XRCC1-201ENST00000262887 FOXI1Q12951 378 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 LCNL1Q6ZST4 164 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 Q8N8P6 123 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 ZNF575Q86XF7 245 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 MYOZ3Q8TDC0 251 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 RPEQ96AT9 228 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 CNFNQ9BYD5 112 aa11.66□□□□□ -0.54
XRCC1-201ENST00000262887 RALYQ9UKM9 306 aaKnown RBP11.66□□□□□ -0.54
XRCC1-201ENST00000262887 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
XRCC1-201ENST00000262887 NCBP2LA6PVI3 153 aaKnown RBP11.65□□□□□ -0.54
XRCC1-201ENST00000262887 NCOR2Q9Y618 2525 aa11.65□□□□□ -0.54
XRCC1-201ENST00000262887 XGP55808 180 aa11.65□□□□□ -0.54
XRCC1-201ENST00000262887 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
XRCC1-201ENST00000262887 SRSF8Q9BRL6 282 aaKnown RBP11.65□□□□□ -0.54
XRCC1-201ENST00000262887 RAB1BQ9H0U4 201 aa11.65□□□□□ -0.54
XRCC1-201ENST00000262887 TRBV7-3A0A075B6L6 115 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 COX7A1P24310 79 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 UFC1Q9Y3C8 167 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 PPIFP30405 207 aaKnown RBP11.64□□□□□ -0.55
XRCC1-201ENST00000262887 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
XRCC1-201ENST00000262887 GFRALQ6UXV0 394 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 IGLV2-18A0A075B6J9 118 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 A0A087WX48 190 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 IGFL4Q6B9Z1 124 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 APC2O95996 2303 aa11.64□□□□□ -0.55
XRCC1-201ENST00000262887 NDUFA3O95167 84 aa11.63□□□□□ -0.55
XRCC1-201ENST00000262887 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
XRCC1-201ENST00000262887 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
XRCC1-201ENST00000262887 NBASA2RRP1 2371 aa11.63□□□□□ -0.55
XRCC1-201ENST00000262887 BRI3O95415 125 aa11.63□□□□□ -0.55
XRCC1-201ENST00000262887 PLNP26678 52 aa11.63□□□□□ -0.55
XRCC1-201ENST00000262887 ROS1P08922 2347 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 ACACAQ13085 2346 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 FABP5P3A8MUU1 101 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 HOXA3O43365 443 aaPredicted RBP11.62□□□□□ -0.55
XRCC1-201ENST00000262887 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 DEFB109BQ30KR1 87 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 LINC01619G3V211 115 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 CLEC3BP05452 202 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 RPL32P62910 135 aaKnown RBP11.62□□□□□ -0.55
XRCC1-201ENST00000262887 LAGE3Q14657 143 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 Q6ZS92 163 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 SMIM20Q8N5G0 67 aa11.62□□□□□ -0.55
XRCC1-201ENST00000262887 FHL3Q13643 280 aa11.61□□□□□ -0.55
XRCC1-201ENST00000262887 MORN3Q6PF18 240 aaPredicted RBP11.61□□□□□ -0.55
XRCC1-201ENST00000262887 MFAP4P55083 255 aa11.61□□□□□ -0.55
XRCC1-201ENST00000262887 CFAP126Q5VTH2 177 aa11.61□□□□□ -0.55
XRCC1-201ENST00000262887 PSMG3-AS1Q96PY0 264 aa11.61□□□□□ -0.55
XRCC1-201ENST00000262887 RNF5Q99942 180 aa11.61□□□□□ -0.55
XRCC1-201ENST00000262887 MYMXA0A1B0GTQ4 84 aa11.6□□□□□ -0.55
XRCC1-201ENST00000262887 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
XRCC1-201ENST00000262887 DLX4Q92988 240 aaPredicted RBP11.6□□□□□ -0.55
XRCC1-201ENST00000262887 DYNLRB1Q9NP97 96 aa11.6□□□□□ -0.55
XRCC1-201ENST00000262887 TNFRSF18Q9Y5U5 241 aa11.6□□□□□ -0.55
XRCC1-201ENST00000262887 TPRP12270 2363 aaKnown RBP11.6□□□□□ -0.55
XRCC1-201ENST00000262887 TIMM23O14925 209 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
XRCC1-201ENST00000262887 ATRXP46100 2492 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 RNASE6Q93091 150 aaKnown RBP11.59□□□□□ -0.55
XRCC1-201ENST00000262887 PRSS29PA6NIE9 313 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 IGHG4P01861 327 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 ERCC8Q13216 396 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 ZFAND6Q6FIF0 208 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 NFE4Q86UQ8 179 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 GLMPQ8WWB7 406 aa11.59□□□□□ -0.55
XRCC1-201ENST00000262887 H7C1H1 209 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 NBR2O15453 112 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 IGHV3-23P01764 117 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 TRGV3P03979 118 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 EFNA4P52798 201 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 DYNAPQ8N1N2 210 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
XRCC1-201ENST00000262887 TRAV26-2A0A0B4J265 109 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 F8VRH5 84 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 F8W735 103 aaPredicted RBP11.57□□□□□ -0.56
XRCC1-201ENST00000262887 NRACQ8N912 160 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 C21orf62Q9NYP8 219 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 IGLV11-55A0A075B6I3 123 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 FAM90A27PA6NNH2 459 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 NHLRC4P0CG21 123 aaPredicted RBP11.57□□□□□ -0.56
XRCC1-201ENST00000262887 TEX29Q8N6K0 151 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 CFHR4Q92496 578 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 RAX2Q96IS3 184 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 VCX2Q9H322 139 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 PKDREJQ9NTG1 2253 aa11.57□□□□□ -0.56
XRCC1-201ENST00000262887 TRAV12-1A0A0B4J245 112 aa11.56□□□□□ -0.56
XRCC1-201ENST00000262887 PSMB2P49721 201 aa11.56□□□□□ -0.56
XRCC1-201ENST00000262887 DEFB124Q8NES8 71 aa11.56□□□□□ -0.56
XRCC1-201ENST00000262887 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
XRCC1-201ENST00000262887 IGHV3OR16-8A0A075B7F1 116 aa11.55□□□□□ -0.56
XRCC1-201ENST00000262887 IL17RELQ6ZVW7 336 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 328.3 ms