RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 IGLV2-11P01706 119 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 TRGC2P03986 189 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BJP06899 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BOP23527 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BBP33778 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 CSN1S1P47710 185 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 AKR1D1P51857 326 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BDP58876 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 ERVFC1-1P60608 527 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BCP62807 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 S100A12P80511 92 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 KLF5Q13887 457 aaPredicted RBP9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST2H2BEQ16778 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.9□□□□□ -0.82
SGCA-201ENST00000262018 DNLZQ5SXM8 178 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BHQ93079 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BNQ99877 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 HIST1H2BMQ99879 126 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 MLST8Q9BVC4 326 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 UFC1Q9Y3C8 167 aa9.9□□□□□ -0.82
SGCA-201ENST00000262018 LGALS9O00182 355 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 MGST1P10620 155 aaKnown RBP9.9□□□□□ -0.83
SGCA-201ENST00000262018 S100A2P29034 98 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 PSG3Q16557 428 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 TM4SF20Q53R12 229 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 CT83Q5H943 113 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 ACTL10Q5JWF8 245 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 Q86TA4 180 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 SMPXQ9UHP9 88 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 KMT2AQ03164 3969 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 ABCA13Q86UQ4 5058 aa9.9□□□□□ -0.83
SGCA-201ENST00000262018 A8MWP6 167 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 CHEK1O14757 476 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 PHOX2AO14813 284 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 SYNJ2BPP57105 145 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 IBA57Q5T440 356 aaKnown RBP9.89□□□□□ -0.83
SGCA-201ENST00000262018 NHLRC2Q8NBF2 726 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 MRPL53Q96EL3 112 aaKnown RBP9.89□□□□□ -0.83
SGCA-201ENST00000262018 SGK494Q96LW2 274 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 RHPN1-AS1Q9BWJ2 59 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 CLEC5AQ9NY25 188 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 V9GYV3 84 aa9.89□□□□□ -0.83
SGCA-201ENST00000262018 TRAV8-1A0A0A6YYK1 113 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 TRAV8-2A0A0B4J237 113 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 TRGC1P0CF51 173 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 HLA-DMBP28068 263 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 OR9G4Q8NGQ1 327 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 GNB1LQ9BYB4 327 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 PEMTQ9UBM1 199 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 PSG8Q9UQ74 426 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 ZFP30Q9Y2G7 519 aa9.88□□□□□ -0.83
SGCA-201ENST00000262018 TMEM213A2RRL7 107 aa9.87□□□□□ -0.83
SGCA-201ENST00000262018 IGLV1-51P01701 117 aa9.87□□□□□ -0.83
SGCA-201ENST00000262018 BMI1P35226 326 aa9.87□□□□□ -0.83
SGCA-201ENST00000262018 IGFL4Q6B9Z1 124 aa9.87□□□□□ -0.83
SGCA-201ENST00000262018 LCN12Q6JVE5 192 aa9.87□□□□□ -0.83
SGCA-201ENST00000262018 PRNTQ86SH4 94 aa9.87□□□□□ -0.83
SGCA-201ENST00000262018 RNASE7Q9H1E1 156 aaKnown RBP9.87□□□□□ -0.83
SGCA-201ENST00000262018 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
SGCA-201ENST00000262018 SMIM27A0A1W2PRY6 76 aa9.86□□□□□ -0.83
SGCA-201ENST00000262018 SOCS3O14543 225 aa9.86□□□□□ -0.83
SGCA-201ENST00000262018 NDUFA6P56556 154 aa9.86□□□□□ -0.83
SGCA-201ENST00000262018 ATP5L2Q7Z4Y8 100 aa9.86□□□□□ -0.83
SGCA-201ENST00000262018 FRZBQ92765 325 aa9.86□□□□□ -0.83
SGCA-201ENST00000262018 GFRA4Q9GZZ7 299 aa9.86□□□□□ -0.83
SGCA-201ENST00000262018 TRAPPC1Q9Y5R8 145 aa9.86□□□□□ -0.83
SGCA-201ENST00000262018 IGKV2-40A0A087WW87 121 aaPredicted RBP9.85□□□□□ -0.83
SGCA-201ENST00000262018 RBAKDNA6NC62 111 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 C19orf71A6NCJ1 209 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 ZNF705FA8MVS1 300 aaPredicted RBP9.85□□□□□ -0.83
SGCA-201ENST00000262018 IGKV2D-40P01614 121 aaPredicted RBP9.85□□□□□ -0.83
SGCA-201ENST00000262018 HLA-DQA1P01909 254 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 COX8CQ7Z4L0 72 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 RNF182Q8N6D2 247 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 NUDT10Q8NFP7 164 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 OR4B1Q8NGF8 309 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 NUDT11Q96G61 164 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 C12orf57Q99622 126 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 NRN1Q9NPD7 142 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 MUC4Q99102 2169 aa9.85□□□□□ -0.83
SGCA-201ENST00000262018 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
SGCA-201ENST00000262018 GATCO43716 136 aaKnown RBP9.84□□□□□ -0.83
SGCA-201ENST00000262018 EDN2P20800 178 aa9.84□□□□□ -0.83
SGCA-201ENST00000262018 GTSCR1Q86UQ5 136 aa9.84□□□□□ -0.83
SGCA-201ENST00000262018 C16orf92Q96LL3 132 aa9.84□□□□□ -0.83
SGCA-201ENST00000262018 SIGLEC8Q9NYZ4 499 aa9.84□□□□□ -0.83
SGCA-201ENST00000262018 ZNF705GA8MUZ8 300 aaPredicted RBP9.83□□□□□ -0.84
SGCA-201ENST00000262018 A8MWL6 223 aa9.83□□□□□ -0.84
SGCA-201ENST00000262018 PRAC2D3DTV9 90 aa9.83□□□□□ -0.84
SGCA-201ENST00000262018 PRR27Q6MZM9 219 aa9.83□□□□□ -0.84
SGCA-201ENST00000262018 LINC00322Q6ZN03 302 aaPredicted RBP9.83□□□□□ -0.84
SGCA-201ENST00000262018 TCF24Q7RTU0 167 aa9.83□□□□□ -0.84
SGCA-201ENST00000262018 PACRGQ96M98 296 aaPredicted RBP9.83□□□□□ -0.84
SGCA-201ENST00000262018 VGLL1Q99990 258 aa9.83□□□□□ -0.84
SGCA-201ENST00000262018 NAT8BQ9UHF3 227 aa9.83□□□□□ -0.84
SGCA-201ENST00000262018 IZUMO1RA6ND01 250 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 C2orf70A6NJV1 201 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 CSN3P07498 182 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms