RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 B4DEV8 164 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 APOC3P02656 99 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 HLA-DMBP28068 263 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 ZNF138P52744 262 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 DEFB1P60022 68 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 FOXI2Q6ZQN5 318 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 OR8A1Q8NGG7 326 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 SDF2L1Q9HCN8 221 aa8.51□□□□□ -1.05
PFDN1-201ENST00000261813 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
PFDN1-201ENST00000261813 LTAP01374 205 aa8.5□□□□□ -1.05
PFDN1-201ENST00000261813 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
PFDN1-201ENST00000261813 PRNTQ86SH4 94 aa8.5□□□□□ -1.05
PFDN1-201ENST00000261813 DERL1Q9BUN8 251 aa8.5□□□□□ -1.05
PFDN1-201ENST00000261813 TRAV34A0A0B4J273 112 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 M0R036 132 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 CT45A10P0DMU9 189 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 ADCYAP1P18509 176 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 ACTL10Q5JWF8 245 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 GDF5OSQ5U4N7 250 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 Q86TA4 180 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
PFDN1-201ENST00000261813 STHQ8IWL8 128 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 TMEM183AQ8IXX5 376 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 LINC00479Q96M42 142 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 ODF3Q96PU9 254 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 TM2D3Q9BRN9 247 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 SAV1Q9H4B6 383 aaPredicted RBP8.49□□□□□ -1.05
PFDN1-201ENST00000261813 ZNF492Q9P255 531 aa8.49□□□□□ -1.05
PFDN1-201ENST00000261813 IGKV2-40A0A087WW87 121 aaPredicted RBP8.48□□□□□ -1.05
PFDN1-201ENST00000261813 A0A0J9YX75 114 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 PRAC2D3DTV9 90 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 F6UB75 175 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 IGKV2D-40P01614 121 aaPredicted RBP8.48□□□□□ -1.05
PFDN1-201ENST00000261813 TSPOP30536 169 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 HIST1H1AQ02539 215 aaPredicted RBP8.48□□□□□ -1.05
PFDN1-201ENST00000261813 RHEBQ15382 184 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 COX8CQ7Z4L0 72 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 LINC01551Q86U37 167 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 VGLL1Q99990 258 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 AGPAT4-IT1Q9H0P7 198 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 TRBV20OR9-2A0A075B6H5 130 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 TRAV8-1A0A0A6YYK1 113 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 H3BMM0 161 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 PPP1R2P9O14990 202 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 GCGP01275 180 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 MT-ND4LP03901 98 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 S100A6P06703 90 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 NHLRC4P0CG21 123 aaPredicted RBP8.48□□□□□ -1.05
PFDN1-201ENST00000261813 HLA-DRB4P13762 266 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 LEPP41159 167 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 APOC4P55056 127 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 RPL23P62829 140 aaKnown RBP8.48□□□□□ -1.05
PFDN1-201ENST00000261813 ADIRFQ15847 76 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 C15orf54Q8N8G6 183 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 CLRN3Q8NCR9 226 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 DAZAP1Q96EP5 407 aaKnown RBP8.48□□□□□ -1.05
PFDN1-201ENST00000261813 WWC2-AS2Q96NR7 200 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 MLST8Q9BVC4 326 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 RETNQ9HD89 108 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 HLA-DRB4X5D2U9 266 aa8.48□□□□□ -1.05
PFDN1-201ENST00000261813 TENM3Q9P273 2699 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 KIR2DL5BA0A0G2JN68 375 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 KIR2DL5BA0A0G2JPC4 375 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 PRB4P10163 310 aaPredicted RBP8.47□□□□□ -1.05
PFDN1-201ENST00000261813 MGST1P10620 155 aaKnown RBP8.47□□□□□ -1.05
PFDN1-201ENST00000261813 NUTF2P61970 127 aaKnown RBP8.47□□□□□ -1.05
PFDN1-201ENST00000261813 KIR2DL5AQ8N109 375 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 KIR2DL5BQ8NHK3 375 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 ANAPC16Q96DE5 110 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 SGK494Q96LW2 274 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 SPATA25Q9BR10 227 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 CTDSP1Q9GZU7 261 aa8.47□□□□□ -1.05
PFDN1-201ENST00000261813 RYR3Q15413 4870 aa8.46□□□□□ -1.05
PFDN1-201ENST00000261813 A0A087WWC5 75 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 AMBPP02760 352 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
PFDN1-201ENST00000261813 CRISP2P16562 243 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 ERCC8Q13216 396 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 FAM231DQ6ZW35 169 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 OR4B1Q8NGF8 309 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 ISOC2Q96AB3 205 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 CSTL1Q9H114 145 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 TMEM242Q9NWH2 141 aa8.46□□□□□ -1.06
PFDN1-201ENST00000261813 A8MTW9 85 aa8.45□□□□□ -1.06
PFDN1-201ENST00000261813 FABP5P3A8MUU1 101 aa8.45□□□□□ -1.06
PFDN1-201ENST00000261813 IGKV3-20P01619 116 aa8.45□□□□□ -1.06
PFDN1-201ENST00000261813 IGLV2-8P01709 118 aa8.45□□□□□ -1.06
PFDN1-201ENST00000261813 ZNF705DP0CH99 300 aaPredicted RBP8.45□□□□□ -1.06
PFDN1-201ENST00000261813 ZNF705BP0CI00 300 aaPredicted RBP8.45□□□□□ -1.06
PFDN1-201ENST00000261813 ERVFC1-1P60608 527 aa8.45□□□□□ -1.06
PFDN1-201ENST00000261813 DEFB135Q30KP9 77 aa8.45□□□□□ -1.06
PFDN1-201ENST00000261813 FAM162BQ5T6X4 162 aa8.45□□□□□ -1.06
PFDN1-201ENST00000261813 SFRP2Q96HF1 295 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms