RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 A0A1B0GXF2 115 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 HCFC1P51610 2035 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 MBD3L4A6NDZ8 208 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-201ENST00000261646 MBD3L3A6NE82 208 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-201ENST00000261646 MBD3L5A6NJ08 208 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-201ENST00000261646 F8VRH5 84 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 NPC2P61916 151 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 MBD3L2Q8NHZ7 208 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-201ENST00000261646 SRSF8Q9BRL6 282 aaKnown RBP12.85□□□□□ -0.35
SREBF1-201ENST00000261646 KLF12Q9Y4X4 402 aa12.85□□□□□ -0.35
SREBF1-201ENST00000261646 H3BRN7 92 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 IL17RELQ6ZVW7 336 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 K7EM74 188 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 SRD5A1P18405 259 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 WT1P19544 449 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-201ENST00000261646 ZNF491Q8N8L2 437 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 NOTCH2Q04721 2471 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-201ENST00000261646 RRN3P1Q2M238 152 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 UTF1Q5T230 341 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 TNFRSF18Q9Y5U5 241 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 SPEGQ15772 3267 aa12.84□□□□□ -0.35
SREBF1-201ENST00000261646 TANC2Q9HCD6 1990 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 DNAL4O96015 105 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 HLA-DMBP28068 263 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 C2orf82Q6UX34 121 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 SIGLEC15Q6ZMC9 328 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 MBD6Q96DN6 1003 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 LOXP28300 417 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-201ENST00000261646 TNRC6AQ8NDV7 1962 aaKnown RBP12.83□□□□□ -0.36
SREBF1-201ENST00000261646 KIAA1549Q9HCM3 1950 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 C19orf54Q5BKX5 351 aa12.83□□□□□ -0.36
SREBF1-201ENST00000261646 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 TAL2Q16559 108 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 Q8N976 141 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 IGHV3OR16-12A0A075B7B8 117 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 ZNF672Q499Z4 452 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-201ENST00000261646 TRANK1O15050 2925 aa12.82□□□□□ -0.36
SREBF1-201ENST00000261646 PAX8Q06710 450 aa12.81□□□□□ -0.36
SREBF1-201ENST00000261646 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
SREBF1-201ENST00000261646 TRBV20-1A0A075B6N2 111 aa12.81□□□□□ -0.36
SREBF1-201ENST00000261646 SNRPD3P62318 126 aaKnown RBP12.81□□□□□ -0.36
SREBF1-201ENST00000261646 LAMA1P25391 3075 aa12.81□□□□□ -0.36
SREBF1-201ENST00000261646 C19orf71A6NCJ1 209 aa12.81□□□□□ -0.36
SREBF1-201ENST00000261646 ZNF48Q96MX3 618 aaPredicted RBP12.81□□□□□ -0.36
SREBF1-201ENST00000261646 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-201ENST00000261646 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
SREBF1-201ENST00000261646 IGKV1-17P01599 117 aa12.8□□□□□ -0.36
SREBF1-201ENST00000261646 LINC00311Q8N616 119 aa12.8□□□□□ -0.36
SREBF1-201ENST00000261646 Q8N7P7 452 aa12.8□□□□□ -0.36
SREBF1-201ENST00000261646 M0R2P5 195 aa12.8□□□□□ -0.36
SREBF1-201ENST00000261646 A0A087WWL8 130 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 A0A087WX48 190 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 B5MCH6 92 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 CD28P10747 220 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 EIF4EBP1Q13541 118 aaPredicted RBP12.79□□□□□ -0.36
SREBF1-201ENST00000261646 NEGR1Q7Z3B1 354 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 RITA1Q96K30 269 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 SMIM2Q9BVW6 85 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 VCYO14598 125 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 NUP37Q8NFH4 326 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 NPFFO15130 113 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 PRSS22Q9GZN4 317 aa12.79□□□□□ -0.36
SREBF1-201ENST00000261646 NUP210LQ5VU65 1888 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 TRAV26-1A0A087WT03 109 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 RNASE1P07998 156 aaKnown RBP12.78□□□□□ -0.36
SREBF1-201ENST00000261646 ATXN8Q156A1 80 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 TP53TG1Q9Y2A0 90 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 TEX36Q5VZQ5 186 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 VMO1Q7Z5L0 202 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 OVOL1O14753 267 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 C3orf36Q3SXR2 165 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 SP5Q6BEB4 398 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-201ENST00000261646 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-201ENST00000261646 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
SREBF1-201ENST00000261646 ZNF876PQ49A33 203 aa12.77□□□□□ -0.36
SREBF1-201ENST00000261646 WNK1Q9H4A3 2382 aa12.77□□□□□ -0.36
SREBF1-201ENST00000261646 LHBP01229 141 aa12.77□□□□□ -0.37
SREBF1-201ENST00000261646 OR13C6PQ8NH95 151 aa12.77□□□□□ -0.37
SREBF1-201ENST00000261646 SS18L2Q9UHA2 77 aa12.77□□□□□ -0.37
SREBF1-201ENST00000261646 A0A0G2JNJ9 132 aa12.77□□□□□ -0.37
SREBF1-201ENST00000261646 SPRY2O43597 315 aa12.77□□□□□ -0.37
SREBF1-201ENST00000261646 Q9UFV3 132 aa12.77□□□□□ -0.37
SREBF1-201ENST00000261646 C9orf139Q6ZV77 190 aa12.76□□□□□ -0.37
SREBF1-201ENST00000261646 PRR30Q53SZ7 412 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-201ENST00000261646 COPS9Q8WXC6 57 aa12.76□□□□□ -0.37
SREBF1-201ENST00000261646 SPXQ9BT56 116 aa12.76□□□□□ -0.37
SREBF1-201ENST00000261646 MLST8Q9BVC4 326 aa12.76□□□□□ -0.37
SREBF1-201ENST00000261646 PRO1854Q9UHT4 67 aa12.76□□□□□ -0.37
SREBF1-201ENST00000261646 IGKV1D-37A0A075B6S9 117 aa12.76□□□□□ -0.37
SREBF1-201ENST00000261646 FGF6P10767 208 aa12.76□□□□□ -0.37
SREBF1-201ENST00000261646 ZNF688P0C7X2 276 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 TMEM219Q86XT9 240 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 DYNLRB2Q8TF09 96 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 IGFBPL1Q8WX77 278 aa12.75□□□□□ -0.37
SREBF1-201ENST00000261646 LINC00477Q96M19 166 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms