RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 C12orf74Q32Q52 190 aa8.38□□□□□ -1.07
CHRNA1-201ENST00000261007 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
CHRNA1-201ENST00000261007 RNF125Q96EQ8 232 aa8.38□□□□□ -1.07
CHRNA1-201ENST00000261007 ASCL2Q99929 193 aa8.38□□□□□ -1.07
CHRNA1-201ENST00000261007 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 TMSB15BA0A087X1C1 80 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 M0R3E3 92 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 CKS1BP61024 79 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 PRR25Q96S07 402 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 NAV3Q8IVL0 2385 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 NCBP2LA6PVI3 153 aaKnown RBP8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 PRSS47A8MTI9 375 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 TNFRSF6BO95407 300 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 EGR2P11161 476 aaPredicted RBP8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 LMO4P61968 165 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 GTSCR1Q86UQ5 136 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 Q8N8P6 123 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 MRAP2Q96G30 205 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 BPESC1Q9GZL8 116 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
CHRNA1-201ENST00000261007 ABCA4P78363 2273 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 RAB9AP51151 201 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 SCGB2A2Q13296 93 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 RRN3P1Q2M238 152 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 WFDC3Q8IUB2 231 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 FOXC2Q99958 501 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 DMXL2Q8TDJ6 3036 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 IGF2RP11717 2491 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 ATMQ13315 3056 aa8.36□□□□□ -1.07
CHRNA1-201ENST00000261007 H3BMG7 143 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 IL4P05112 153 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 KLK9Q2XQG4 91 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 ETDBQ3ZM63 59 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 LCNL1Q6ZST4 164 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 FANCD2OSQ96PS1 177 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 TTTY13Q9BZ97 58 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 C21orf62Q9NYP8 219 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 KLK9Q9UKQ9 250 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 C19orf84I3L1E1 186 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 PLXNB1O43157 2135 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 DYNAPQ8N1N2 210 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 Q8N9W7 124 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 PSMG3-AS1Q96PY0 264 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 PIMREGQ9BSJ6 248 aa8.35□□□□□ -1.07
CHRNA1-201ENST00000261007 IGLV2-18A0A075B6J9 118 aa8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 SH2D6Q7Z4S9 175 aa8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 MAPKAPK5-AS1Q8N8E1 139 aa8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 FAM110DQ8TAY7 271 aaPredicted RBP8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 MYOZ3Q8TDC0 251 aa8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
CHRNA1-201ENST00000261007 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 A0A087WX48 190 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 IGHV7-81A0A0B4J1V7 117 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 NPFFO15130 113 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 RPL7P18124 248 aaKnown RBP8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 PLNP26678 52 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 MRPL16Q9NX20 251 aaKnown RBP8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 TPRP12270 2363 aaKnown RBP8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 TRAV40A0A0B4J280 105 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 FABP5P3A8MUU1 101 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 SAA4P35542 130 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 HIST1H4GQ99525 98 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 TMEM160Q9NX00 188 aa8.33□□□□□ -1.08
CHRNA1-201ENST00000261007 IGKV2-40A0A087WW87 121 aaPredicted RBP8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 TRAV12-1A0A0B4J245 112 aa8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 IGKV2D-40P01614 121 aaPredicted RBP8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 IGHV4-39P01824 125 aa8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 ZNF80P51504 273 aaPredicted RBP8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 NDPQ00604 133 aa8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 CCL19Q99731 98 aa8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 MRPL35Q9NZE8 188 aaKnown RBP8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 DCHS1Q96JQ0 3298 aa8.32□□□□□ -1.08
CHRNA1-201ENST00000261007 FOXI1Q12951 378 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 LAGE3Q14657 143 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 ZNF418Q8TF45 676 aaPredicted RBP8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 VCX2Q9H322 139 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 MSRB1Q9NZV6 116 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 COL6A6A6NMZ7 2263 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 HIVEP3Q5T1R4 2406 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 CENPVL3A0A0U1RRI6 287 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 HOXA3O43365 443 aaPredicted RBP8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 APOMO95445 188 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 ORM1P02763 201 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 AJUBAQ96IF1 538 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 C1QTNF4Q9BXJ3 329 aa8.31□□□□□ -1.08
CHRNA1-201ENST00000261007 ARHGAP32A7KAX9 2087 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 AMTNQ6UX39 209 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 C10orf105Q8TEF2 133 aa8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 GEMIN7Q9H840 131 aaKnown RBP8.3□□□□□ -1.08
CHRNA1-201ENST00000261007 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms