RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ERCC8Q13216 396 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 ZC2HC1AQ96GY0 325 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 NRN1Q9NPD7 142 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 A8MWL6 223 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 HAX1O00165 279 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 KLHL30-AS1Q8NEE0 82 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 OR11H1Q8NG94 326 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 C20orf173Q96LM9 149 aa14.32□□□□□ -0.12
TRIM47-201ENST00000254816 ZNF324O75467 553 aaPredicted RBP14.31□□□□□ -0.12
TRIM47-201ENST00000254816 LURAP1LQ8IV03 231 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 KIR2DL5BA0A0G2JN68 375 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 KIR2DL5BA0A0G2JPC4 375 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 CD28P10747 220 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 NTF3P20783 257 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 KIR2DL5AQ8N109 375 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 C4orf3Q8WVX3 66 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 ZFP30Q9Y2G7 519 aa14.31□□□□□ -0.12
TRIM47-201ENST00000254816 SERTM2A0A1B0GWG4 89 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 HBBP68871 147 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 ATP5L2Q7Z4Y8 100 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 SOCS3O14543 225 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 CT83Q5H943 113 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 TEX43Q6ZNM6 134 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 ARL6IP6Q8N6S5 226 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 ALKBH7Q9BT30 221 aaPredicted RBP14.3□□□□□ -0.12
TRIM47-201ENST00000254816 C16orf95Q9H693 158 aa14.3□□□□□ -0.12
TRIM47-201ENST00000254816 A0A1W2PRX2 142 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 PAM16Q9Y3D7 125 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 A0A1B0GV90 55 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 LINC01619G3V211 115 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 LGALS9O00182 355 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 CRIP1P50238 77 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 DEFB1P60022 68 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 KLF5Q13887 457 aaPredicted RBP14.29□□□□□ -0.12
TRIM47-201ENST00000254816 NIT1Q86X76 327 aa14.29□□□□□ -0.12
TRIM47-201ENST00000254816 RBPMS2Q6ZRY4 209 aaKnown RBP14.28□□□□□ -0.12
TRIM47-201ENST00000254816 WFDC3Q8IUB2 231 aa14.28□□□□□ -0.12
TRIM47-201ENST00000254816 Q8N976 141 aa14.28□□□□□ -0.12
TRIM47-201ENST00000254816 OR1N2Q8NGR9 330 aa14.28□□□□□ -0.12
TRIM47-201ENST00000254816 DPF1Q92782 380 aa14.28□□□□□ -0.12
TRIM47-201ENST00000254816 NPIPB6E9PJ23 425 aa14.27□□□□□ -0.12
TRIM47-201ENST00000254816 PRR25Q96S07 402 aa14.27□□□□□ -0.12
TRIM47-201ENST00000254816 NSD1Q96L73 2696 aaPredicted RBP14.27□□□□□ -0.13
TRIM47-201ENST00000254816 FLNBO75369 2602 aaKnown RBP14.27□□□□□ -0.13
TRIM47-201ENST00000254816 C2orf70A6NJV1 201 aa14.27□□□□□ -0.13
TRIM47-201ENST00000254816 FOXA3P55318 350 aaPredicted RBP14.27□□□□□ -0.13
TRIM47-201ENST00000254816 RNASEKQ6P5S7 137 aaKnown RBP14.27□□□□□ -0.13
TRIM47-201ENST00000254816 ZNF738Q8NE65 137 aa14.27□□□□□ -0.13
TRIM47-201ENST00000254816 SETD2Q9BYW2 2564 aaPredicted RBP14.26□□□□□ -0.13
TRIM47-201ENST00000254816 EREGO14944 169 aa14.26□□□□□ -0.13
TRIM47-201ENST00000254816 MRPL53Q96EL3 112 aaKnown RBP14.26□□□□□ -0.13
TRIM47-201ENST00000254816 TFPI2P48307 235 aa14.26□□□□□ -0.13
TRIM47-201ENST00000254816 JMJD8Q96S16 334 aa14.26□□□□□ -0.13
TRIM47-201ENST00000254816 CITED2Q99967 270 aaPredicted RBP14.26□□□□□ -0.13
TRIM47-201ENST00000254816 VAMP8Q9BV40 100 aa14.26□□□□□ -0.13
TRIM47-201ENST00000254816 GFRA4Q9GZZ7 299 aa14.26□□□□□ -0.13
TRIM47-201ENST00000254816 AGPAT4-IT1Q9H0P7 198 aa14.26□□□□□ -0.13
TRIM47-201ENST00000254816 SETXQ7Z333 2677 aaKnown RBP14.26□□□□□ -0.13
TRIM47-201ENST00000254816 M0QZ24 198 aa14.25□□□□□ -0.13
TRIM47-201ENST00000254816 FOSL1P15407 271 aa14.25□□□□□ -0.13
TRIM47-201ENST00000254816 ADAMTSL5Q6ZMM2 481 aa14.25□□□□□ -0.13
TRIM47-201ENST00000254816 FN1P02751 2386 aaKnown RBP14.25□□□□□ -0.13
TRIM47-201ENST00000254816 RBAKDNA6NC62 111 aa14.25□□□□□ -0.13
TRIM47-201ENST00000254816 C3orf79P0CE67 100 aa14.25□□□□□ -0.13
TRIM47-201ENST00000254816 DLX4Q92988 240 aaPredicted RBP14.25□□□□□ -0.13
TRIM47-201ENST00000254816 HSBP1O75506 76 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 ZNF80P51504 273 aaPredicted RBP14.24□□□□□ -0.13
TRIM47-201ENST00000254816 SAPCD1Q5SSQ6 148 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 CT45A10P0DMU9 189 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 BMI1P35226 326 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 OR4B1Q8NGF8 309 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 DCANP1Q8TF63 244 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 RAX2Q96IS3 184 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 MS4A6AQ9H2W1 248 aa14.24□□□□□ -0.13
TRIM47-201ENST00000254816 F6UB75 175 aa14.23□□□□□ -0.13
TRIM47-201ENST00000254816 CLEC5AQ9NY25 188 aa14.23□□□□□ -0.13
TRIM47-201ENST00000254816 FBLL1A6NHQ2 334 aaKnown RBP14.22□□□□□ -0.13
TRIM47-201ENST00000254816 ZNF705AQ6ZN79 300 aaPredicted RBP14.22□□□□□ -0.13
TRIM47-201ENST00000254816 URB1-AS1Q96HZ7 61 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 M0R2Z0 102 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 TCF21O43680 179 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 SH2D1AO60880 128 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 PMCHL1Q16048 86 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 TMEM78Q5T7P6 136 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 BORCS7Q96B45 105 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 TPPP3Q9BW30 176 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 ZMAT5Q9UDW3 170 aaKnown RBP14.22□□□□□ -0.13
TRIM47-201ENST00000254816 WNK1Q9H4A3 2382 aa14.22□□□□□ -0.13
TRIM47-201ENST00000254816 FAM231BA6NCW3 169 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 NDUFA7O95182 113 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 ARMS2P0C7Q2 107 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 OR9G4Q8NGQ1 327 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 C20orf144Q9BQM9 153 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 C2orf88Q9BSF0 95 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 NDFIP1Q9BT67 221 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 SNHG12Q9BXW3 62 aa14.21□□□□□ -0.13
TRIM47-201ENST00000254816 ZNF138P52744 262 aa14.21□□□□□ -0.14
TRIM47-201ENST00000254816 C9orf47Q6ZRZ4 202 aa14.21□□□□□ -0.14
TRIM47-201ENST00000254816 LINC00469Q8N7U9 141 aa14.21□□□□□ -0.14
TRIM47-201ENST00000254816 ATOH7Q8N100 152 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms