RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 LOC389332A0A1B0GUA5 103 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 FAM106AQ4KMX7 169 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 TM4SF20Q53R12 229 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 PRSS3P2Q8NHM4 247 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 IGKV3-7A0A075B6H7 116 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 A0A0G2JLM5 398 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 IFI27P40305 119 aaPredicted RBP16.5■□□□□ 0.23
CLN6-201ENST00000249806 DEFB1P60022 68 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 RPL11P62913 178 aaKnown RBP16.5■□□□□ 0.23
CLN6-201ENST00000249806 C10orf99Q6UWK7 81 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 AP5S1Q9NUS5 200 aa16.5■□□□□ 0.23
CLN6-201ENST00000249806 NBPF19A0A087WUL8 3843 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 C9orf139Q6ZV77 190 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 ZNF738Q8NE65 137 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 U3KQK5 164 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 TEX15Q9BXT5 2789 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 SMKR1H3BMG3 65 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 RAB4AP20338 218 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 FOXE3Q13461 319 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 LBHQ53QV2 105 aaPredicted RBP16.49■□□□□ 0.23
CLN6-201ENST00000249806 ORMDL3Q8N138 153 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 PRELID3AQ96N28 172 aa16.49■□□□□ 0.23
CLN6-201ENST00000249806 ZNF469Q96JG9 3925 aaPredicted RBP16.48■□□□□ 0.23
CLN6-201ENST00000249806 SYS1-DBNDD2H3BUS1 97 aa16.48■□□□□ 0.23
CLN6-201ENST00000249806 EDN2P20800 178 aa16.48■□□□□ 0.23
CLN6-201ENST00000249806 M0R143 59 aa16.47■□□□□ 0.23
CLN6-201ENST00000249806 CRXO43186 299 aaPredicted RBP16.47■□□□□ 0.23
CLN6-201ENST00000249806 SOCS3O14543 225 aa16.47■□□□□ 0.23
CLN6-201ENST00000249806 HIST1H1AQ02539 215 aaPredicted RBP16.47■□□□□ 0.23
CLN6-201ENST00000249806 LOXL1Q08397 574 aaPredicted RBP16.47■□□□□ 0.23
CLN6-201ENST00000249806 FA2HQ7L5A8 372 aa16.47■□□□□ 0.23
CLN6-201ENST00000249806 RHPN1-AS1Q9BWJ2 59 aa16.47■□□□□ 0.23
CLN6-201ENST00000249806 CNFNQ9BYD5 112 aa16.47■□□□□ 0.23
CLN6-201ENST00000249806 SIGLEC8Q9NYZ4 499 aa16.47■□□□□ 0.23
CLN6-201ENST00000249806 J3KRW8 73 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 OR5AL1P0C617 328 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 IGLC3P0DOY3 106 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 CR1P17927 2039 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 PRR9Q5T870 116 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 MCRIP2Q9BUT9 160 aaKnown RBP16.46■□□□□ 0.23
CLN6-201ENST00000249806 J3QLI3 93 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 NCR2O95944 276 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 PSMB8P28062 276 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 CKS2P33552 79 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 DMRTA1Q5VZB9 504 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 TMEM191AQ9H0A3 160 aa16.46■□□□□ 0.23
CLN6-201ENST00000249806 PEF1Q9UBV8 284 aaKnown RBP16.46■□□□□ 0.23
CLN6-201ENST00000249806 IGHV7-4-1A0A0J9YVY3 117 aa16.45■□□□□ 0.22
CLN6-201ENST00000249806 PPP1R14DQ9NXH3 145 aa16.45■□□□□ 0.22
CLN6-201ENST00000249806 TRAV9-2A0A087WT02 112 aa16.45■□□□□ 0.22
CLN6-201ENST00000249806 SRD5A1P18405 259 aa16.45■□□□□ 0.22
CLN6-201ENST00000249806 RNF185Q96GF1 192 aa16.45■□□□□ 0.22
CLN6-201ENST00000249806 DAZ1Q9NQZ3 744 aaKnown RBP16.45■□□□□ 0.22
CLN6-201ENST00000249806 H0Y8G0 127 aa16.44■□□□□ 0.22
CLN6-201ENST00000249806 GAS8-AS1O95177 125 aa16.44■□□□□ 0.22
CLN6-201ENST00000249806 OR4C46A6NHA9 309 aa16.43■□□□□ 0.22
CLN6-201ENST00000249806 NPYP01303 97 aa16.43■□□□□ 0.22
CLN6-201ENST00000249806 IGHV4-31P0DP07 118 aa16.43■□□□□ 0.22
CLN6-201ENST00000249806 IGLL1P15814 213 aa16.43■□□□□ 0.22
CLN6-201ENST00000249806 PRSS57Q6UWY2 283 aa16.43■□□□□ 0.22
CLN6-201ENST00000249806 F6UB75 175 aa16.43■□□□□ 0.22
CLN6-201ENST00000249806 MAP1LC3CQ9BXW4 147 aa16.43■□□□□ 0.22
CLN6-201ENST00000249806 FXYD7P58549 80 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 OR10AG1Q8NH19 301 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 UQCR10Q9UDW1 63 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 HSPB8Q9UJY1 196 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 APCP25054 2843 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 A0A096LNJ9 63 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 KLHDC1Q8N7A1 406 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 OR10J6PQ8NGY7 276 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 CREBBPQ92793 2442 aa16.42■□□□□ 0.22
CLN6-201ENST00000249806 LINC00477Q96M19 166 aa16.41■□□□□ 0.22
CLN6-201ENST00000249806 SMPXQ9UHP9 88 aa16.41■□□□□ 0.22
CLN6-201ENST00000249806 ZNF580Q9UK33 172 aa16.41■□□□□ 0.22
CLN6-201ENST00000249806 DEFB113Q30KQ7 82 aa16.41■□□□□ 0.22
CLN6-201ENST00000249806 CYB5R2Q6BCY4 276 aa16.41■□□□□ 0.22
CLN6-201ENST00000249806 ZNF747Q9BV97 191 aa16.41■□□□□ 0.22
CLN6-201ENST00000249806 ZFAND2AQ8N6M9 145 aa16.4■□□□□ 0.22
CLN6-201ENST00000249806 OVOL1O14753 267 aa16.39■□□□□ 0.22
CLN6-201ENST00000249806 RPLP1P05386 114 aaKnown RBP16.39■□□□□ 0.22
CLN6-201ENST00000249806 Q5PR19 223 aa16.39■□□□□ 0.22
CLN6-201ENST00000249806 Q6ZN92 141 aa16.39■□□□□ 0.22
CLN6-201ENST00000249806 PMCHL2Q9BQD1 86 aa16.39■□□□□ 0.22
CLN6-201ENST00000249806 FSHBP01225 129 aa16.39■□□□□ 0.21
CLN6-201ENST00000249806 EVI2AP22794 236 aa16.39■□□□□ 0.21
CLN6-201ENST00000249806 LENEPQ9Y5L5 61 aa16.39■□□□□ 0.21
CLN6-201ENST00000249806 Q6YL49 198 aa16.38■□□□□ 0.21
CLN6-201ENST00000249806 VPREB3Q9UKI3 123 aa16.38■□□□□ 0.21
CLN6-201ENST00000249806 hDV102S1A0JD36 115 aa16.38■□□□□ 0.21
CLN6-201ENST00000249806 GATA1P15976 413 aaPredicted RBP16.38■□□□□ 0.21
CLN6-201ENST00000249806 KIR3DS1Q14943 382 aa16.38■□□□□ 0.21
CLN6-201ENST00000249806 PET117Q6UWS5 81 aa16.38■□□□□ 0.21
CLN6-201ENST00000249806 BEX4Q9NWD9 120 aaPredicted RBP16.38■□□□□ 0.21
CLN6-201ENST00000249806 C20orf202A1L168 122 aa16.37■□□□□ 0.21
CLN6-201ENST00000249806 NUTF2P61970 127 aaKnown RBP16.37■□□□□ 0.21
CLN6-201ENST00000249806 BATFQ16520 125 aa16.37■□□□□ 0.21
CLN6-201ENST00000249806 OR8A1Q8NGG7 326 aa16.37■□□□□ 0.21
CLN6-201ENST00000249806 ZMAT5Q9UDW3 170 aaKnown RBP16.37■□□□□ 0.21
CLN6-201ENST00000249806 K7EMT4 169 aa16.37■□□□□ 0.21
CLN6-201ENST00000249806 TCF21O43680 179 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms