RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 KRTAP24-1Q3LI83 254 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 SPATA45Q537H7 98 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 FAM223AQ8IWN6 122 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 ZNF502Q8TBZ5 544 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 AAMDCQ9H7C9 122 aa12.96□□□□□ -0.33
CDKN1A-201ENST00000244741 ELANEP08246 267 aa12.96□□□□□ -0.34
CDKN1A-201ENST00000244741 KRTAP10-3P60369 221 aa12.96□□□□□ -0.34
CDKN1A-201ENST00000244741 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.34
CDKN1A-201ENST00000244741 OR4X2Q8NGF9 303 aa12.96□□□□□ -0.34
CDKN1A-201ENST00000244741 EEF1AKMT3Q96AZ1 226 aa12.96□□□□□ -0.34
CDKN1A-201ENST00000244741 IGHV3OR16-8A0A075B7F1 116 aa12.95□□□□□ -0.34
CDKN1A-201ENST00000244741 ARMS2P0C7Q2 107 aa12.95□□□□□ -0.34
CDKN1A-201ENST00000244741 PMCHL1Q16048 86 aa12.95□□□□□ -0.34
CDKN1A-201ENST00000244741 A0A1B0GUT8 65 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 KLK9Q2XQG4 91 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 DEFB136Q30KP8 78 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 ATOH7Q8N100 152 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 CITED2Q99967 270 aaPredicted RBP12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 NDFIP1Q9BT67 221 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 KLK9Q9UKQ9 250 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 SMAD5-AS1Q9Y6J3 95 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 C2orf70A6NJV1 201 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 DUX3Q96PT4 197 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 CLEC5AQ9NY25 188 aa12.94□□□□□ -0.34
CDKN1A-201ENST00000244741 STAB1Q9NY15 2570 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 CSN1S1P47710 185 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 PSG9Q00887 426 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 TXN2Q99757 166 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 RABAC1Q9UI14 185 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 IGKV2-40A0A087WW87 121 aaPredicted RBP12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 A0A0G2JLM5 398 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 IGKV2D-40P01614 121 aaPredicted RBP12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 BTF3P20290 206 aaKnown RBP12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 MAJINQ3KP22 176 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
CDKN1A-201ENST00000244741 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.92□□□□□ -0.34
CDKN1A-201ENST00000244741 TRBV7-1A0A0A6YYK4 115 aa12.92□□□□□ -0.34
CDKN1A-201ENST00000244741 BRI3O95415 125 aa12.92□□□□□ -0.34
CDKN1A-201ENST00000244741 SSTP61278 116 aa12.92□□□□□ -0.34
CDKN1A-201ENST00000244741 FAM162BQ5T6X4 162 aa12.92□□□□□ -0.34
CDKN1A-201ENST00000244741 SPATA12Q7Z6I5 190 aa12.92□□□□□ -0.34
CDKN1A-201ENST00000244741 TMEM89A2RUT3 159 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 RIGQ13278 110 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 RNF152Q8N8N0 203 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 MYOZ3Q8TDC0 251 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 CHCHD1Q96BP2 118 aaKnown RBP12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 TRRAPQ9Y4A5 3859 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 IGHV1-24A0A0C4DH33 117 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 SCGB2A1O75556 95 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 LINC00614P0C842 121 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 CT45A10P0DMU9 189 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 IGLC3P0DOY3 106 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 ARL3P36405 182 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 ZNF138P52744 262 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 MRPL52Q86TS9 123 aaKnown RBP12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 KLHL30-AS1Q8NEE0 82 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 TPPP3Q9BW30 176 aa12.91□□□□□ -0.34
CDKN1A-201ENST00000244741 SERTM2A0A1B0GWG4 89 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 UBE2E2Q96LR5 201 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 VWFP04275 2813 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 TMSB15BA0A087X1C1 80 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 TCAPO15273 167 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 SH2D1AO60880 128 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 GATD1Q8NB37 220 aa12.9□□□□□ -0.34
CDKN1A-201ENST00000244741 RELQ04864 619 aaPredicted RBP12.89□□□□□ -0.35
CDKN1A-201ENST00000244741 NSUN5P1Q3KNT7 163 aa12.89□□□□□ -0.35
CDKN1A-201ENST00000244741 PRR25Q96S07 402 aa12.89□□□□□ -0.35
CDKN1A-201ENST00000244741 VGLL1Q99990 258 aa12.89□□□□□ -0.35
CDKN1A-201ENST00000244741 PEF1Q9UBV8 284 aaKnown RBP12.89□□□□□ -0.35
CDKN1A-201ENST00000244741 WFDC12Q8WWY7 111 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 UQCR10Q9UDW1 63 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 A0A087WW49 117 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 LGALS1P09382 135 aaKnown RBP12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 Q6AWC8 147 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 COX8CQ7Z4L0 72 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 Q8TAT8 98 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 TMEM70Q9BUB7 260 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 ZFAND3Q9H8U3 227 aa12.88□□□□□ -0.35
CDKN1A-201ENST00000244741 A0A1B0GW15 77 aa12.87□□□□□ -0.35
CDKN1A-201ENST00000244741 CSN3P07498 182 aa12.87□□□□□ -0.35
CDKN1A-201ENST00000244741 SAPCD1Q5SSQ6 148 aa12.87□□□□□ -0.35
CDKN1A-201ENST00000244741 LYZL1Q6UWQ5 148 aa12.87□□□□□ -0.35
CDKN1A-201ENST00000244741 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
CDKN1A-201ENST00000244741 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
CDKN1A-201ENST00000244741 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
CDKN1A-201ENST00000244741 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 BATFQ16520 125 aa12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 IGHV3-66A0A0C4DH42 116 aa12.86□□□□□ -0.35
CDKN1A-201ENST00000244741 BUB3O43684 328 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms