RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 CRLF1O75462 422 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 TRPT1Q86TN4 253 aaKnown RBP11.85□□□□□ -0.51
HOXC12-201ENST00000243103 MLST8Q9BVC4 326 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 TM2D2Q9BX73 214 aa11.85□□□□□ -0.51
HOXC12-201ENST00000243103 PRSS22Q9GZN4 317 aa11.84□□□□□ -0.51
HOXC12-201ENST00000243103 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
HOXC12-201ENST00000243103 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
HOXC12-201ENST00000243103 SH2D1AO60880 128 aa11.84□□□□□ -0.51
HOXC12-201ENST00000243103 TNFAIP6P98066 277 aaPredicted RBP11.84□□□□□ -0.51
HOXC12-201ENST00000243103 ODF1Q14990 250 aa11.84□□□□□ -0.51
HOXC12-201ENST00000243103 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
HOXC12-201ENST00000243103 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
HOXC12-201ENST00000243103 ZFHX3Q15911 3703 aa11.83□□□□□ -0.52
HOXC12-201ENST00000243103 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
HOXC12-201ENST00000243103 ABCA2Q9BZC7 2435 aa11.83□□□□□ -0.52
HOXC12-201ENST00000243103 SMCPP49901 116 aaPredicted RBP11.83□□□□□ -0.52
HOXC12-201ENST00000243103 ERCC8Q13216 396 aa11.83□□□□□ -0.52
HOXC12-201ENST00000243103 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
HOXC12-201ENST00000243103 ZNF492Q9P255 531 aa11.83□□□□□ -0.52
HOXC12-201ENST00000243103 ANKRD29Q8N6D5 301 aa11.82□□□□□ -0.52
HOXC12-201ENST00000243103 SLC25A39Q9BZJ4 359 aaPredicted RBP11.82□□□□□ -0.52
HOXC12-201ENST00000243103 RAXQ9Y2V3 346 aa11.82□□□□□ -0.52
HOXC12-201ENST00000243103 MEIG1Q5JSS6 88 aa11.82□□□□□ -0.52
HOXC12-201ENST00000243103 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
HOXC12-201ENST00000243103 UTP20O75691 2785 aaKnown RBP11.81□□□□□ -0.52
HOXC12-201ENST00000243103 TNFRSF6BO95407 300 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 SLC25A16P16260 332 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 Q6ZT83 130 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 WI2-2373I1.2A0A1W2PRP0 233 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 FAM90A9PA6NNJ1 464 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 ATP5J2P56134 94 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 Q6AWC8 147 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 ABCA12Q86UK0 2595 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 A8MWV9 139 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 GAGE7O76087 117 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 GAGE4Q13068 117 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 PHLDA1Q8WV24 401 aaPredicted RBP11.81□□□□□ -0.52
HOXC12-201ENST00000243103 SPRY4Q9C004 299 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 LINC00312Q9Y6C7 94 aa11.81□□□□□ -0.52
HOXC12-201ENST00000243103 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
HOXC12-201ENST00000243103 MDS2Q8NDY4 140 aa11.8□□□□□ -0.52
HOXC12-201ENST00000243103 PLEKHB2Q96CS7 222 aa11.8□□□□□ -0.52
HOXC12-201ENST00000243103 HHLA3Q9XRX5 114 aa11.8□□□□□ -0.52
HOXC12-201ENST00000243103 MGPP08493 103 aa11.8□□□□□ -0.52
HOXC12-201ENST00000243103 PRR30Q53SZ7 412 aaPredicted RBP11.8□□□□□ -0.52
HOXC12-201ENST00000243103 M0R381 172 aa11.8□□□□□ -0.52
HOXC12-201ENST00000243103 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
HOXC12-201ENST00000243103 HES1Q14469 280 aa11.8□□□□□ -0.52
HOXC12-201ENST00000243103 NTN5Q8WTR8 489 aaPredicted RBP11.8□□□□□ -0.52
HOXC12-201ENST00000243103 PPDPFQ9H3Y8 114 aa11.8□□□□□ -0.52
HOXC12-201ENST00000243103 TRGV3P03979 118 aa11.79□□□□□ -0.52
HOXC12-201ENST00000243103 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
HOXC12-201ENST00000243103 LYPD2Q6UXB3 125 aa11.79□□□□□ -0.52
HOXC12-201ENST00000243103 PRSS2P07478 247 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
HOXC12-201ENST00000243103 CHCHD5Q9BSY4 110 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 NDUFA4L2Q9NRX3 87 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 TCL1BO95988 128 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 GP9P14770 177 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 RNF182Q8N6D2 247 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 RPL27AP46776 148 aaKnown RBP11.78□□□□□ -0.52
HOXC12-201ENST00000243103 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
HOXC12-201ENST00000243103 HIVEP3Q5T1R4 2406 aa11.77□□□□□ -0.52
HOXC12-201ENST00000243103 ZNF80P51504 273 aaPredicted RBP11.77□□□□□ -0.52
HOXC12-201ENST00000243103 KLRD1Q13241 179 aa11.77□□□□□ -0.52
HOXC12-201ENST00000243103 DYNLRB1Q9NP97 96 aa11.77□□□□□ -0.52
HOXC12-201ENST00000243103 ZNF785A8K8V0 405 aa11.77□□□□□ -0.53
HOXC12-201ENST00000243103 ADARB2-AS1A8MUL3 147 aa11.77□□□□□ -0.53
HOXC12-201ENST00000243103 C5orf64Q2M2E5 130 aa11.77□□□□□ -0.53
HOXC12-201ENST00000243103 TMEM95Q3KNT9 176 aa11.77□□□□□ -0.53
HOXC12-201ENST00000243103 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
HOXC12-201ENST00000243103 PIEZO1Q92508 2521 aa11.77□□□□□ -0.53
HOXC12-201ENST00000243103 TRAV12-3A0A0B4J271 114 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.76□□□□□ -0.53
HOXC12-201ENST00000243103 PRR7Q8TB68 274 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 SCGB3A1Q96QR1 104 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 NGBQ9NPG2 151 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 OTORQ9NRC9 128 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 VPS13CQ709C8 3753 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 M0QXV9 152 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 PPDPFLQ8WWR9 84 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
HOXC12-201ENST00000243103 BRI3O95415 125 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 ZNF688P0C7X2 276 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 MORN3Q6PF18 240 aaPredicted RBP11.75□□□□□ -0.53
HOXC12-201ENST00000243103 TRAV2A0A0B4J234 112 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 LOC107984640A0A0U1RRK4 108 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 TSPAN13O95857 204 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 IGLV2-11P01706 119 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 VMA21Q3ZAQ7 101 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 LRRK2Q5S007 2527 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 TEX49A0A1B0GTD5 131 aa11.75□□□□□ -0.53
HOXC12-201ENST00000243103 VSTM5A8MXK1 200 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms