RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 Q6ZN92 141 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 TMEM191AQ9H0A3 160 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 U3KQK5 164 aa6.04□□□□□ -1.44
CXCR4-201ENST00000241393 RBAKDNA6NC62 111 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 OR2T8A6NH00 312 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 SH2D1AO60880 128 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 GOSR1O95249 250 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 TSPOP30536 169 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 LMO4P61968 165 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 SPATA12Q7Z6I5 190 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 MRPL53Q96EL3 112 aaKnown RBP6.03□□□□□ -1.44
CXCR4-201ENST00000241393 SLC50A1Q9BRV3 221 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 MAP1LC3CQ9BXW4 147 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 LAMTOR2Q9Y2Q5 125 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 DMXL2Q8TDJ6 3036 aa6.03□□□□□ -1.44
CXCR4-201ENST00000241393 LAMA5O15230 3695 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 A0A1W2PPR1 153 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 OR4C46A6NHA9 309 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 NDUFS7O75251 213 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 IGLL1P15814 213 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 RELQ04864 619 aaPredicted RBP6.02□□□□□ -1.45
CXCR4-201ENST00000241393 UNQ5815/PRO19632Q6UWF5 114 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 MS4A6AQ9H2W1 248 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 CLEC5AQ9NY25 188 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 SMAD5-AS1Q9Y6J3 95 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 S4R3C0 116 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 DCHS1Q96JQ0 3298 aa6.02□□□□□ -1.45
CXCR4-201ENST00000241393 ARHGAP32A7KAX9 2087 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 TRBV7-1A0A0A6YYK4 115 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 CENPVL3A0A0U1RRI6 287 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 HSBP1L1C9JCN9 74 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 DLEU1O43261 78 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 ZNF25P17030 456 aaPredicted RBP6.01□□□□□ -1.45
CXCR4-201ENST00000241393 SAA4P35542 130 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 CRIP2P52943 208 aaPredicted RBP6.01□□□□□ -1.45
CXCR4-201ENST00000241393 RHOGP84095 191 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 C15orf32Q32M92 178 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 FAM104BQ5XKR9 115 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 Q71RC1 249 aaPredicted RBP6.01□□□□□ -1.45
CXCR4-201ENST00000241393 FA2HQ7L5A8 372 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 OR10AG1Q8NH19 301 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 EEF1AKMT3Q96AZ1 226 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 TMEM208Q9BTX3 173 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 CNFNQ9BYD5 112 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 UBTD1Q9HAC8 227 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 IGKV2-40A0A087WW87 121 aaPredicted RBP6.01□□□□□ -1.45
CXCR4-201ENST00000241393 NPFFO15130 113 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 ATP6V0E1O15342 81 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 BUB3O43684 328 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 IGKV2D-40P01614 121 aaPredicted RBP6.01□□□□□ -1.45
CXCR4-201ENST00000241393 IGHG4P01861 327 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 IGLC6P0CF74 106 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 VPREB1P12018 145 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 GPR183P32249 361 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 LINC01545Q5VT33 79 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 LYZL1Q6UWQ5 148 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 C9orf47Q6ZRZ4 202 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 ATOH7Q8N100 152 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 ORMDL3Q8N138 153 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 FER1L6-AS1Q8NA97 138 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 ITLN2Q8WWU7 325 aaPredicted RBP6.01□□□□□ -1.45
CXCR4-201ENST00000241393 PRORYQ9H606 182 aa6.01□□□□□ -1.45
CXCR4-201ENST00000241393 PIEZO1Q92508 2521 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 FABP5P3A8MUU1 101 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 BRI3O95415 125 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 IGHV3-23P01764 117 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 PPBPP02775 128 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 BATFQ16520 125 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 HIST2H2BCQ6DN03 193 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 HIST2H2BDQ6DRA6 164 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 C5orf56Q8N8D9 126 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 ASCL2Q99929 193 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 BPESC1Q9GZL8 116 aa6□□□□□ -1.45
CXCR4-201ENST00000241393 IGLV5-37A0A075B6J1 123 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 FAM223BA6NKX1 122 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 HIST1H1AQ02539 215 aaPredicted RBP5.99□□□□□ -1.45
CXCR4-201ENST00000241393 PAX8Q06710 450 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 ECSCRQ19T08 205 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 MAJINQ3KP22 176 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 FAM223AQ8IWN6 122 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 ORAOV1Q8WV07 137 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 PRELID3AQ96N28 172 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 METTL26Q96S19 204 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 VGLL1Q99990 258 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 PMCHL2Q9BQD1 86 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 TPPP3Q9BW30 176 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 MOB4Q9Y3A3 225 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 GOLT1BQ9Y3E0 138 aa5.99□□□□□ -1.45
CXCR4-201ENST00000241393 SMG1Q96Q15 3661 aaKnown RBP5.98□□□□□ -1.45
CXCR4-201ENST00000241393 CLPSL1A2RUU4 121 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 D6R8Y8 96 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 G0S2P27469 103 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 MRPL51Q4U2R6 128 aaKnown RBP5.98□□□□□ -1.45
CXCR4-201ENST00000241393 PSMG4Q5JS54 123 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 SLC25A34Q6PIV7 304 aa5.98□□□□□ -1.45
CXCR4-201ENST00000241393 STPG4Q8N801 248 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms