RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.69
PCDHB5-201ENST00000231134 MAFAQ8NHW3 353 aaPredicted RBP10.71□□□□□ -0.69
PCDHB5-201ENST00000231134 RHODO00212 210 aa10.71□□□□□ -0.7
PCDHB5-201ENST00000231134 TNFRSF13BO14836 293 aaPredicted RBP10.71□□□□□ -0.7
PCDHB5-201ENST00000231134 SLC25A20O43772 301 aa10.71□□□□□ -0.7
PCDHB5-201ENST00000231134 IGHV4-39P01824 125 aa10.71□□□□□ -0.7
PCDHB5-201ENST00000231134 SIGLEC15Q6ZMC9 328 aa10.71□□□□□ -0.7
PCDHB5-201ENST00000231134 SHISA9B4DS77 424 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 CGB3P0DN86 165 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 CGB7P0DN87 165 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 SCGB3A1Q96QR1 104 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 APC2O95996 2303 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 A0A087WX48 190 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 M0QXV9 152 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 ATP5J2P56134 94 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 C15orf53Q8NAA6 179 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 LAGE3Q14657 143 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 DTX2Q86UW9 622 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 PIFOQ8TCI5 191 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 VCX2Q9H322 139 aa10.7□□□□□ -0.7
PCDHB5-201ENST00000231134 LAMA5O15230 3695 aa10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 CD40P25942 277 aa10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 HLA-DMBP28068 263 aa10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 RNF185Q96GF1 192 aa10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 SPRY2O43597 315 aa10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 PLNP26678 52 aa10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 CRIP2P52943 208 aaPredicted RBP10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 PCSK5Q92824 1860 aa10.69□□□□□ -0.7
PCDHB5-201ENST00000231134 J3KRW8 73 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 MGAQ8IWI9 3026 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 IGHV3-23P01764 117 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 TRGV3P03979 118 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 ZNF71Q9NQZ8 489 aaPredicted RBP10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 TNFRSF18Q9Y5U5 241 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 H7C1H1 209 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 GATD1Q8NB37 220 aa10.68□□□□□ -0.7
PCDHB5-201ENST00000231134 F8VRH5 84 aa10.67□□□□□ -0.7
PCDHB5-201ENST00000231134 TNFAIP6P98066 277 aaPredicted RBP10.67□□□□□ -0.7
PCDHB5-201ENST00000231134 Q8N8P6 123 aa10.67□□□□□ -0.7
PCDHB5-201ENST00000231134 CHCHD5Q9BSY4 110 aa10.67□□□□□ -0.7
PCDHB5-201ENST00000231134 TRAV8-4A0A0B4J246 113 aa10.67□□□□□ -0.7
PCDHB5-201ENST00000231134 IGHV1-18A0A0C4DH31 117 aa10.67□□□□□ -0.7
PCDHB5-201ENST00000231134 IGHV3OR16-13A0A075B7E8 117 aa10.66□□□□□ -0.7
PCDHB5-201ENST00000231134 IGHV3-74A0A0B4J1X5 117 aa10.66□□□□□ -0.7
PCDHB5-201ENST00000231134 FCN3O75636 299 aa10.66□□□□□ -0.7
PCDHB5-201ENST00000231134 ERCC8Q13216 396 aa10.66□□□□□ -0.7
PCDHB5-201ENST00000231134 PRR25Q96S07 402 aa10.66□□□□□ -0.7
PCDHB5-201ENST00000231134 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
PCDHB5-201ENST00000231134 ZNF576Q9H609 170 aa10.66□□□□□ -0.7
PCDHB5-201ENST00000231134 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
PCDHB5-201ENST00000231134 CCL17Q92583 94 aa10.65□□□□□ -0.7
PCDHB5-201ENST00000231134 RNF125Q96EQ8 232 aa10.65□□□□□ -0.7
PCDHB5-201ENST00000231134 ZNF833PQ6ZTB9 187 aa10.65□□□□□ -0.7
PCDHB5-201ENST00000231134 SHANK2-AS3Q9BTD1 123 aa10.65□□□□□ -0.7
PCDHB5-201ENST00000231134 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.71
PCDHB5-201ENST00000231134 IGKV1-17P01599 117 aa10.65□□□□□ -0.71
PCDHB5-201ENST00000231134 SRD5A1P18405 259 aa10.65□□□□□ -0.71
PCDHB5-201ENST00000231134 Q6ZT83 130 aa10.65□□□□□ -0.71
PCDHB5-201ENST00000231134 NDUFA11Q86Y39 141 aa10.65□□□□□ -0.71
PCDHB5-201ENST00000231134 C9orf106Q8NAJ2 232 aa10.65□□□□□ -0.71
PCDHB5-201ENST00000231134 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.71
PCDHB5-201ENST00000231134 ACACAQ13085 2346 aa10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 COX7A1P24310 79 aa10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 CCL11P51671 97 aa10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 TMEM14CQ9P0S9 112 aa10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 IGKV3-15P01624 115 aa10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 ZNF56Q15929 161 aa10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 SPTAN1Q13813 2472 aaKnown RBP10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 DMXL1Q9Y485 3027 aa10.64□□□□□ -0.71
PCDHB5-201ENST00000231134 TRAV2A0A0B4J234 112 aa10.63□□□□□ -0.71
PCDHB5-201ENST00000231134 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
PCDHB5-201ENST00000231134 Q8N1Y9 231 aa10.63□□□□□ -0.71
PCDHB5-201ENST00000231134 IGLV2-23P01705 113 aa10.63□□□□□ -0.71
PCDHB5-201ENST00000231134 TCF15Q12870 199 aa10.63□□□□□ -0.71
PCDHB5-201ENST00000231134 TMEM170BQ5T4T1 132 aa10.63□□□□□ -0.71
PCDHB5-201ENST00000231134 HOXB4P17483 251 aaPredicted RBP10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 UBE2D3P61077 147 aa10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 UBE2D2P62837 147 aa10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 IGHV3-66A0A0C4DH42 116 aa10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 WT1P19544 449 aaPredicted RBP10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 SIT1Q9Y3P8 196 aa10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 IGHV3-64A0A075B6Q5 118 aa10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 FOXC1Q12948 553 aa10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 CREBBPQ92793 2442 aa10.62□□□□□ -0.71
PCDHB5-201ENST00000231134 HERVK_113P61574 105 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 PMS2CLQ68D20 193 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 PTPRZ1P23471 2315 aaPredicted RBP10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 MGPP08493 103 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 UBE2D1P51668 147 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 Q6ZS46 218 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 FAM57AQ8TBR7 257 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 PRO1854Q9UHT4 67 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 SVEP1Q4LDE5 3571 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 CFC1BP0CG36 223 aa10.61□□□□□ -0.71
PCDHB5-201ENST00000231134 CFC1P0CG37 223 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms