RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 GTSCR1Q86UQ5 136 aa8.2□□□□□ -1.1
DDX11-201ENST00000228264 SPAG8Q99932 426 aaPredicted RBP8.2□□□□□ -1.1
DDX11-201ENST00000228264 IGLV3-9A0A075B6K5 115 aa8.2□□□□□ -1.1
DDX11-201ENST00000228264 WI2-2373I1.2A0A1W2PRP0 233 aa8.2□□□□□ -1.1
DDX11-201ENST00000228264 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
DDX11-201ENST00000228264 C8orf46Q8TAG6 207 aa8.2□□□□□ -1.1
DDX11-201ENST00000228264 SCNM1Q9BWG6 230 aa8.2□□□□□ -1.1
DDX11-201ENST00000228264 PRTN3P24158 256 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 FAM169BQ8N8A8 192 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 PRELID3AQ96N28 172 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 CSDC2Q9Y534 153 aaKnown RBP8.19□□□□□ -1.1
DDX11-201ENST00000228264 SONP18583 2426 aaKnown RBP8.19□□□□□ -1.1
DDX11-201ENST00000228264 IGHV3OR16-13A0A075B7E8 117 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 IGHV3-74A0A0B4J1X5 117 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 FABP5P3A8MUU1 101 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 TEX22C9J3V5 150 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 SIGLEC15Q6ZMC9 328 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 TTC9CQ8N5M4 171 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 NHP2Q9NX24 153 aaKnown RBP8.19□□□□□ -1.1
DDX11-201ENST00000228264 TLN2Q9Y4G6 2542 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 SMAD7O15105 426 aaKnown RBP8.19□□□□□ -1.1
DDX11-201ENST00000228264 NDUFS7O75251 213 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 APOMO95445 188 aa8.19□□□□□ -1.1
DDX11-201ENST00000228264 A1L4Q6 167 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 MBD3L4A6NDZ8 208 aaPredicted RBP8.18□□□□□ -1.1
DDX11-201ENST00000228264 MBD3L3A6NE82 208 aaPredicted RBP8.18□□□□□ -1.1
DDX11-201ENST00000228264 MBD3L5A6NJ08 208 aaPredicted RBP8.18□□□□□ -1.1
DDX11-201ENST00000228264 LINC01548A6NM66 108 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 F8W1H4 67 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 IL4P05112 153 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 EGR2P11161 476 aaPredicted RBP8.18□□□□□ -1.1
DDX11-201ENST00000228264 GAGE2BQ13066 116 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 OR13C6PQ8NH95 151 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 MBD3L2Q8NHZ7 208 aaPredicted RBP8.18□□□□□ -1.1
DDX11-201ENST00000228264 MS4A6AQ9H2W1 248 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 ZNF492Q9P255 531 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 PAX8Q06710 450 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 VGLL1Q99990 258 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 ANKHD1Q8IWZ3 2542 aaKnown RBP8.18□□□□□ -1.1
DDX11-201ENST00000228264 IGHV3-66A0A0C4DH42 116 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 ORM1P02763 201 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 LOXP28300 417 aaPredicted RBP8.18□□□□□ -1.1
DDX11-201ENST00000228264 DUX5Q96PT3 197 aa8.18□□□□□ -1.1
DDX11-201ENST00000228264 TRBV19A0A075B6N1 114 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 TRBV20-1A0A075B6N2 111 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 ARPC1AQ92747 370 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 ZNF414Q96IQ9 312 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 SH2D1AO60880 128 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 MT-ATP8P03928 68 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 SRSF1Q07955 248 aaKnown RBP eCLIP8.17□□□□□ -1.11e-6■■■■□ 20.8
DDX11-201ENST00000228264 FAM57AQ8TBR7 257 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 LINC00574Q9H8X3 128 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 H3BMG7 143 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 ERCC8Q13216 396 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 TWIST1Q15672 202 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 COL25A1Q9BXS0 654 aaPredicted RBP8.17□□□□□ -1.1
DDX11-201ENST00000228264 SIGLEC9Q9Y336 463 aa8.17□□□□□ -1.1
DDX11-201ENST00000228264 NACAE9PAV3 2078 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 GAGE13Q4V321 117 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 CT83Q5H943 113 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 TRGV9Q99603 122 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 MAP1LC3AQ9H492 121 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 CENPEQ02224 2701 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 GATA4P43694 442 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 RPL11P62913 178 aaKnown RBP8.16□□□□□ -1.1
DDX11-201ENST00000228264 PPP1R27Q86WC6 154 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 LINC01560Q8TB33 94 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 GFRA4Q9GZZ7 299 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 HHLA3Q9XRX5 114 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 I3L2K1 104 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 OTORQ9NRC9 128 aa8.16□□□□□ -1.1
DDX11-201ENST00000228264 WNK1Q9H4A3 2382 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 IGHV3-49A0A0A0MS15 119 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 HOXB4P17483 251 aaPredicted RBP8.15□□□□□ -1.1
DDX11-201ENST00000228264 CKS2P33552 79 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 FAM104BQ5XKR9 115 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 RNF182Q8N6D2 247 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 C20orf78Q9BR46 151 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 TMEM160Q9NX00 188 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 PRSS29PA6NIE9 313 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 K7EIM0 57 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 SNCGO76070 127 aa8.15□□□□□ -1.1
DDX11-201ENST00000228264 RNASE6Q93091 150 aaKnown RBP8.15□□□□□ -1.1
DDX11-201ENST00000228264 SPANXB1Q9NS25 103 aaPredicted RBP8.15□□□□□ -1.1
DDX11-201ENST00000228264 TMEM178BH3BS89 294 aa8.15□□□□□ -1.11
DDX11-201ENST00000228264 TRGV3P03979 118 aa8.15□□□□□ -1.11
DDX11-201ENST00000228264 IGHV1-8P0DP01 117 aa8.15□□□□□ -1.11
DDX11-201ENST00000228264 FOXI2Q6ZQN5 318 aa8.15□□□□□ -1.11
DDX11-201ENST00000228264 ZNF491Q8N8L2 437 aa8.15□□□□□ -1.11
DDX11-201ENST00000228264 DLX6P56179 175 aa8.14□□□□□ -1.11
DDX11-201ENST00000228264 TEX36Q5VZQ5 186 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms