RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TIMM8BQ9Y5J9 83 aaPredicted RBP6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 TLN2Q9Y4G6 2542 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 CHD6Q8TD26 2715 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 J3KRW8 73 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 LINC01559Q495D7 138 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 FAM104BQ5XKR9 115 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 LINC00173Q6ZV60 143 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 PSMG3-AS1Q96PY0 264 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 RHPN1-AS1Q9BWJ2 59 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 MSRB1Q9NZV6 116 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 PEF1Q9UBV8 284 aaKnown RBP6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 IGKV3D-20A0A0C4DH25 116 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 SRD5A1P18405 259 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 BTF3P20290 206 aaKnown RBP6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 Q96MF0 132 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 DAZ1Q9NQZ3 744 aaKnown RBP6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 VPREB3Q9UKI3 123 aa6.07□□□□□ -1.44
HMGXB4-201ENST00000216106 IGHV7-4-1A0A0J9YVY3 117 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 SOCS3O14543 225 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 SRSF2Q01130 221 aaKnown RBP6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 PRR9Q5T870 116 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 SPATA12Q7Z6I5 190 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 C20orf144Q9BQM9 153 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 LOC389332A0A1B0GUA5 103 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 LEPROTL1O95214 131 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 MRPL51Q4U2R6 128 aaKnown RBP6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 SPATA45Q537H7 98 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 BEX4Q9NWD9 120 aaPredicted RBP6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 ITPR3Q14573 2671 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 PRRC2AP48634 2157 aaKnown RBP6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 SMKR1H3BMG3 65 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 FSHBP01225 129 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 MAJINQ3KP22 176 aa6.06□□□□□ -1.44
HMGXB4-201ENST00000216106 F6UB75 175 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 HOXA3O43365 443 aaPredicted RBP6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 NCR2O95944 276 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 RPLP1P05386 114 aaKnown RBP6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 IFI27P40305 119 aaPredicted RBP6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 HIST1H1AQ02539 215 aaPredicted RBP6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 ZNF705AQ6ZN79 300 aaPredicted RBP6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 ORMDL3Q8N138 153 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 PRSS3P2Q8NHM4 247 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 PRELID3AQ96N28 172 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 DUX5Q96PT3 197 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 TMEM70Q9BUB7 260 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 AP5S1Q9NUS5 200 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 ZNF580Q9UK33 172 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 CUBNO60494 3623 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 Q6YL49 198 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 EREGO14944 169 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 FAM106AQ4KMX7 169 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 FA2HQ7L5A8 372 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 OR10J6PQ8NGY7 276 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 CNFNQ9BYD5 112 aa6.05□□□□□ -1.44
HMGXB4-201ENST00000216106 SMPXQ9UHP9 88 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 H0Y8G0 127 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 CKS2P33552 79 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 HIST2H2BCQ6DN03 193 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 LRRC75A-AS1Q8N1F1 130 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 OR10AG1Q8NH19 301 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 MIEN1Q9BRT3 115 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 TMEM191AQ9H0A3 160 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 PPP1R14DQ9NXH3 145 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 SIGLEC8Q9NYZ4 499 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 U3KQK5 164 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 CCDC168Q8NDH2 2452 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 PRSS57Q6UWY2 283 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 ZNF702PQ9H963 129 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 MYO9AB2RTY4 2548 aa6.04□□□□□ -1.44
HMGXB4-201ENST00000216106 SYS1-DBNDD2H3BUS1 97 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 GAS8-AS1O95177 125 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 NPYP01303 97 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 WFDC3Q8IUB2 231 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 ZFAND2AQ8N6M9 145 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 MCRIP2Q9BUT9 160 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 OVOL1O14753 267 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 RNF185Q96GF1 192 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 LINC00477Q96M19 166 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 SNHG12Q9BXW3 62 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 SONP18583 2426 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 A0A1B0GV90 55 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 H3BVH4 76 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 OR5AL1P0C617 328 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 RAB4AP20338 218 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 FXYD7P58549 80 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 KIR3DS1Q14943 382 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 OR8A1Q8NGG7 326 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 LENEPQ9Y5L5 61 aa6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 FLNAP21333 2647 aaKnown RBP6.03□□□□□ -1.44
HMGXB4-201ENST00000216106 K7EMT4 169 aa6.02□□□□□ -1.44
HMGXB4-201ENST00000216106 CRXO43186 299 aaPredicted RBP6.02□□□□□ -1.44
HMGXB4-201ENST00000216106 AKAP9Q99996 3911 aa6.02□□□□□ -1.45
HMGXB4-201ENST00000216106 OR4C46A6NHA9 309 aa6.02□□□□□ -1.45
HMGXB4-201ENST00000216106 EVI2AP22794 236 aa6.02□□□□□ -1.45
HMGXB4-201ENST00000216106 TFPI2P48307 235 aa6.02□□□□□ -1.45
HMGXB4-201ENST00000216106 DMRTA1Q5VZB9 504 aa6.02□□□□□ -1.45
HMGXB4-201ENST00000216106 MAP1LC3CQ9BXW4 147 aa6.02□□□□□ -1.45
HMGXB4-201ENST00000216106 HSPB8Q9UJY1 196 aa6.02□□□□□ -1.45
HMGXB4-201ENST00000216106 UFC1Q9Y3C8 167 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms