RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 VPREB3Q9UKI3 123 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 TIMM8BQ9Y5J9 83 aaPredicted RBP6.3□□□□□ -1.4
VAMP3-201ENST00000054666 U3KQK5 164 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 ZNF462Q96JM2 2506 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 ZFHX3Q15911 3703 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 SYS1-DBNDD2H3BUS1 97 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 PSMB8P28062 276 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 MRPL51Q4U2R6 128 aaKnown RBP6.3□□□□□ -1.4
VAMP3-201ENST00000054666 LURAP1LQ8IV03 231 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 ATOH7Q8N100 152 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 UQCR10Q9UDW1 63 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 UFC1Q9Y3C8 167 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 CSPG4Q6UVK1 2322 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 SOCS3O14543 225 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 EREGO14944 169 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 PPBPP02775 128 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 FOXE3Q13461 319 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 ANKRD17O75179 2603 aaKnown RBP6.29□□□□□ -1.4
VAMP3-201ENST00000054666 IGKV3-7A0A075B6H7 116 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 IGKV3D-20A0A0C4DH25 116 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 LOC389332A0A1B0GUA5 103 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 OR4C46A6NHA9 309 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 K7EMT4 169 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 CRXO43186 299 aaPredicted RBP6.29□□□□□ -1.4
VAMP3-201ENST00000054666 ID1P41134 155 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 TM4SF20Q53R12 229 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 PET117Q6UWS5 81 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 GPHB5Q86YW7 130 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 LAMTOR2Q9Y2Q5 125 aa6.29□□□□□ -1.4
VAMP3-201ENST00000054666 FLNCQ14315 2725 aa6.28□□□□□ -1.4
VAMP3-201ENST00000054666 ZFYVE26Q68DK2 2539 aa6.28□□□□□ -1.4
VAMP3-201ENST00000054666 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
VAMP3-201ENST00000054666 IFI27P40305 119 aaPredicted RBP6.28□□□□□ -1.4
VAMP3-201ENST00000054666 HNRNPA3P51991 378 aaKnown RBP6.28□□□□□ -1.4
VAMP3-201ENST00000054666 CACNG7P62955 275 aa6.28□□□□□ -1.4
VAMP3-201ENST00000054666 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
VAMP3-201ENST00000054666 SIGLEC8Q9NYZ4 499 aa6.28□□□□□ -1.4
VAMP3-201ENST00000054666 SMPXQ9UHP9 88 aa6.28□□□□□ -1.4
VAMP3-201ENST00000054666 A0A1B0GV90 55 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 H0Y8G0 127 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 J3KRW8 73 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 NCR2O95944 276 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 FSHBP01225 129 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 IGLC3P0DOY3 106 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 KRTAP10-9P60411 292 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 SPANXN1Q5VSR9 72 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 Q6ZN92 141 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 LINC00173Q6ZV60 143 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 OR8A1Q8NGG7 326 aa6.27□□□□□ -1.4
VAMP3-201ENST00000054666 SMKR1H3BMG3 65 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 TCF21O43680 179 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 NPYP01303 97 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 HBDP02042 147 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 ELANEP08246 267 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 Q6YL49 198 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 Q96MF0 132 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 MSRB1Q9NZV6 116 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
VAMP3-201ENST00000054666 TRBV7-9A0A0J9YWB2 115 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 H3BVH4 76 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 S100A4P26447 101 aaKnown RBP6.26□□□□□ -1.41
VAMP3-201ENST00000054666 PRSS57Q6UWY2 283 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 LRRK2Q5S007 2527 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 CR1P17927 2039 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 HOXA3O43365 443 aaPredicted RBP6.26□□□□□ -1.41
VAMP3-201ENST00000054666 SNAI2O43623 268 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 RPLP1P05386 114 aaKnown RBP6.26□□□□□ -1.41
VAMP3-201ENST00000054666 LGALS1P09382 135 aaKnown RBP6.26□□□□□ -1.41
VAMP3-201ENST00000054666 ASIPP42127 132 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 MAJINQ3KP22 176 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 PRR9Q5T870 116 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 SPATA12Q7Z6I5 190 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 ZFAND2AQ8N6M9 145 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 ZNF747Q9BV97 191 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 ST20Q9HBF5 79 aa6.26□□□□□ -1.41
VAMP3-201ENST00000054666 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
VAMP3-201ENST00000054666 IGLL1P15814 213 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 BATFQ16520 125 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 C10orf99Q6UWK7 81 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 TEX29Q8N6K0 151 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 ZNF702PQ9H963 129 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 PRRC2AP48634 2157 aaKnown RBP6.25□□□□□ -1.41
VAMP3-201ENST00000054666 F6UB75 175 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 TNFRSF6BO95407 300 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 SRD5A1P18405 259 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 SNRPD3P62318 126 aaKnown RBP6.25□□□□□ -1.41
VAMP3-201ENST00000054666 LINC01545Q5VT33 79 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 WFDC3Q8IUB2 231 aa6.25□□□□□ -1.41
VAMP3-201ENST00000054666 CELSR1Q9NYQ6 3014 aa6.24□□□□□ -1.41
VAMP3-201ENST00000054666 CREBBPQ92793 2442 aa6.24□□□□□ -1.41
VAMP3-201ENST00000054666 IGHV4-4A0A075B6R2 117 aa6.24□□□□□ -1.41
VAMP3-201ENST00000054666 MED14OSP0DP75 135 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms