RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Fam3dP97805 223 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Q0VG49 157 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Tctn2Q2MV57 700 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ppp1r14aQ91VC7 147 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 GmppaQ922H4 420 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Slc31a2Q9CPU9 143 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Cmtm2bQ9DAC0 210 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 TslpQ9JIE6 140 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Celsr3Q91ZI0 3301 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Awat1A2ADU9 328 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 P01660 111 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 StumQ0VBF8 141 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Sap30lQ5SQF8 182 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Phf13Q8K2W6 296 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Pth2Q91W27 100 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Mpv17lQ99MS3 194 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Rer1Q9CQU3 196 aaKnown RBP8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 MNCb-2875Q9DCB3 74 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Bmp5P49003 452 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gnb1P62874 340 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 1700009N14RikQ14AA6 216 aaKnown RBP8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 MidnQ3TPJ7 465 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 SlaQ60898 281 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1472Q7TQQ9 314 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr153Q7TR48 307 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ankrd55Q8BLD6 626 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr513Q8VFZ3 309 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ykt6Q9CQW1 198 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ndufb10Q9DCS9 176 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Kcnip2Q9JJ69 270 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Trappc2lQ9JME7 139 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Klk4Q9Z0M1 255 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm12666A2AMD0 254 aaKnown RBP8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Znf431E9QAG8 526 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gfra3O35118 397 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Sc5dO88822 299 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Igh-3P01867 404 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ca5aP23589 299 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Efna2P52801 209 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Rpl31P62900 125 aaKnown RBP8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 MiaQ61865 130 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1102Q8VES2 324 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr495Q8VF12 330 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1339Q8VGB1 315 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Rab29Q91YQ1 204 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 AmtnQ9D3J8 213 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Prr30Q9D9B7 401 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm9573F7C950 1606 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Igkv4-51A0N8I8 119 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Vmn1r78K7N608 313 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Zfp58P16372 489 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 GfralQ6SJE0 393 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1454Q8VFW2 307 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1260Q8VGN9 310 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Scrt1Q99M85 348 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Prr15Q9D1T5 122 aa8.13□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm20773A0A0A6YXW2 232 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm20807A0A0A6YXX7 232 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ighv8-9A0A0G2JET1 119 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm45871A0A1B0GRI9 540 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Kdf1A2A9F4 397 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 A930017K11RikE0CXQ2 571 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ear14F6YUX7 155 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Lbhd2G3UW55 114 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm20873J3QMQ9 232 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm20795J3QP49 232 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Rnase2O35291 155 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm21440Q3TTD8 232 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 SnrpcQ62241 159 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Slc37a1Q8R070 531 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr715Q8VG49 315 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 2200002J24RikQ9D807 110 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Ighv7-2A0A0A6YX91 119 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Trbv12-2A0A0B4J1H1 124 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Igkv14-100A0A0G2JG36 117 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 P01790 122 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Mtnd6P03925 172 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Mamld1P0C6A2 803 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr15P23275 312 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Sfrp2P97299 295 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 HaaoQ78JT3 286 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1342Q8VFY3 315 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Tmem178aQ9CZ16 297 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Cml1Q9JIZ0 222 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Tmem183Q9JJB9 375 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Chst5Q9QUP4 395 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Trav17A0A075B655 113 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Igkv1-133A0A0B4J1H8 120 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Zfp930A0A1D5RM15 441 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 PtprbB2RU80 1998 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 A630076J17RikJ3QQ32 107 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Dynlt3P56387 116 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm10384Q3UQ87 92 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Klf17Q8CFA7 341 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Q8VC23 124 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Mob3bQ8VE04 216 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1272Q8VGN8 308 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Kcnk5Q9JK62 502 aa8.12□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Igkv13-84A0A140T8N3 115 aa8.11□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1458A0A1L1SSD5 307 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms