RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 AmtnQ9D3J8 213 aa12.34□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Trem3Q9JKE1 183 aa12.34□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Mlf1Q9QWV4 267 aa12.34□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Trbv3A0A0A6YYE2 117 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Olfr92L7N475 312 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Slc35b1P97858 322 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 ApohQ01339 345 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Shisa6Q3UH99 525 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Rab31Q921E2 194 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 ChtopQ9CY57 249 aaKnown RBP12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Mapk1ip1Q9D7G9 263 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 GgctQ9D7X8 188 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Phf7Q9DAG9 307 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Vmn1r171Q9EPS6 316 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Syngr4Q9Z1L2 233 aa12.33□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Spam1P48794 512 aa12.33□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Klf14Q19A41 325 aa12.33□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr147Q60886 317 aa12.33□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr1474Q7TQQ8 314 aa12.33□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Vstm2aQ8R0A6 236 aa12.33□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Poldip2Q91VA6 368 aa12.33□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Eaf1Q9D4C5 268 aa12.33□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Alox12bO70582 701 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Znf329Q6GQR8 522 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 S100a15aQ6S5I3 108 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 1700069L16RikQ9D9H5 109 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Pcsk5Q04592 1877 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Ranbp2Q9ERU9 3053 aaKnown RBP12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Igkv14-111A0A140T8P9 117 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 A0A286YD13 301 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 A0A286YDM5 308 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Vmn1r224E9PWK2 298 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 P01790 122 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Zfp36P22893 319 aaKnown RBP12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Sssca1P56873 199 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Arl14eplQ3UKZ7 152 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Iqcf4Q6P8Y2 204 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Rph3alQ768S4 302 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 CrhQ8CIT0 187 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Vmn1r179Q8R2B4 323 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Coa3Q9D2R6 108 aa12.32□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Gm4884E9PVP9 694 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 SgcbP82349 320 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Ccl7Q03366 97 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 SriQ6P069 198 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr93Q6UAH1 312 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 C130073F10RikQ8C4L8 201 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 MavsQ8VCF0 503 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr1230Q8VG58 305 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr1233Q8VGN0 305 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Mbnl1Q9JKP5 341 aaKnown RBP12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Ascl2O35885 263 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Klk1b22P15948 259 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Pip5k1aP70182 546 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 MymxQ2Q5T5 84 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Jpt2Q6PGH2 190 aaKnown RBP12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr493Q8VEW5 314 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 H1fooQ8VIK3 304 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Rab30Q923S9 203 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Mrpl3Q99N95 348 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Nubp1Q9R060 320 aa12.31□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Trav16A0A075B653 116 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Ighv1-36A0A0A6YXT2 117 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Cpsf4lE9Q2N0 280 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Ascl5M0QWB7 188 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Pcgf2P23798 342 aaKnown RBP12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 GrnP28798 589 aaKnown RBP12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 AvpP35455 168 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 AesP63002 197 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Q0VG49 157 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Lhfpl2Q8BGA2 222 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Dcaf12Q8BGZ3 453 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Aph1aQ8BVF7 265 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Cysltr2Q920A1 309 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Psg18B2RSG7 476 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 SdcbpO08992 299 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 PpiaP17742 164 aaKnown RBP12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Efna2P52801 209 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Prss38Q3UKY7 322 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Gng7Q61016 68 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Spsb4Q8R5B6 273 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr1258Q8VGN6 311 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Susd2Q9DBX3 820 aa12.3□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Gm28171A0A087WQ19 227 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Gm14124A2AU83 715 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 C2cd4aE9Q861 334 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr1331K7N684 317 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 P01796 113 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 P01797 113 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 P01799 113 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Evi2aP20934 223 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Rbx1P62878 108 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Prrx1P63013 245 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Rpl19P84099 196 aaKnown RBP12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 MyocosQ3UWS6 143 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Rhox10Q4TU83 196 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Spata22Q5SV06 358 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Bst1Q64277 311 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Olfr1333Q7TQV7 317 aa12.29□□□□□ -0.44
Ushbp1-201ENSMUST00000049184 Oraov1Q8CH62 137 aa12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 82.6 ms