RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Fbln7Q501P1 440 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 OstcQ78XF5 149 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr873Q8VFJ0 319 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Mrpl51Q9CPY1 128 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Alpk2Q91ZB0 2144 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Reep5Q60870 185 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr1256Q8VGP1 306 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Erg28Q9ERY9 140 aa8.67□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ascl5M0QWB7 188 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm9Q3UKW5 162 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Q8VE95 218 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr958Q8VEY3 312 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tnfrsf13cQ9D8D0 175 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gbf1Q6DFZ1 1861 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 P06334 169 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Q8CF25 301 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tmem54Q9D7S1 219 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 D330020A13RikQ8C799 211 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Pglyrp3A1A547 347 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 E430018J23RikE9PZQ8 461 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Zfp119bQ8K0G9 543 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ufc1Q9CR09 167 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Slc25a20Q9Z2Z6 301 aaKnown RBP8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr177E9Q7W1 309 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 P01746 140 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Foxa2P35583 459 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 CxadrP97792 365 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Sh3bgrl2Q8BG73 107 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Slamf7Q8BHK6 333 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Srrm4Q8BKA3 608 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 1700013G24RikQ9DAC6 286 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Trav6n-7A0A075B6A6 116 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 St6galnac2P70277 373 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 C1ql2Q8CFR0 287 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Mrpl42Q9CPV3 142 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gkn3Q9D0T7 191 aa8.66□□□□□ -1.02
Ubr1-201ENSMUST00000028728 S100a4P07091 101 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Rasl10bQ5SSG5 203 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Smim19Q80ZU4 107 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Rnf126Q91YL2 313 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Chd3B1AR17 2055 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm5157A0A087WRH8 301 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tex52Q3TTI8 308 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr94Q6UAH0 386 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gpr6Q6YNI2 363 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Klhdc1Q80YG3 406 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Frem3Q5H8B9 2123 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tex54G3UW99 86 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Tnfrsf9P20334 256 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr25Q7TRD6 313 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Anapc13Q8R034 74 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr976Q8VF15 326 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Cela3bQ9CQ52 269 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ighv6-3A0A075B5T2 118 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Gm3045A0A1D5RMA1 209 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Olfr33Q8VGX7 318 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Defb8Q91V82 60 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 Ormdl3Q9CPZ6 153 aa8.65□□□□□ -1.02
Ubr1-201ENSMUST00000028728 A630095N17RikJ3KMM7 116 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Shisa6Q3UH99 525 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Zfp936Q3ULA8 456 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm5615Q3UW02 101 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ccsmst1Q6RUT7 136 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Samd10Q7TST3 202 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ammecr1lQ8JZZ6 310 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Cd300eQ8K249 196 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Fmc1Q9CR13 113 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Rnase4Q9JJH1 148 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Adamts17E9Q4D1 1122 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Zfp977L7N2E7 438 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Dynlt3P56387 116 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr1362Q5SZZ8 308 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Znf329Q6GQR8 522 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Prrg4Q8BGN6 226 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Olfr961Q9EQ84 314 aa8.65□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ttc6G3UYY4 1857 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Hist2h2beQ64524 126 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Chrdl2Q8VEA6 426 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Hyls1Q9CXX0 307 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Fzr1Q9R1K5 493 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Prr19B2RW88 366 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 P18529 117 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 C1qtnf9Q4ZJN1 333 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ercc8Q8CFD5 397 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Zfpl1Q9DB43 310 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Psme4Q5SSW2 1843 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Vamp8O70404 101 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Gm45717A0A1B0GT68 152 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Frrs1lB1AXV0 293 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Fam219bQ14DQ1 197 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tctn2Q2MV57 700 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Bex6Q3TZW7 114 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 H2afb1Q9CQ70 111 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Prss30Q9QYZ9 310 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Ckap5A2AGT5 2032 aaKnown RBP8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Tff1Q08423 87 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Slc35d2Q762D5 326 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Hes7Q8BKT2 225 aa8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 ChtopQ9CY57 249 aaKnown RBP8.64□□□□□ -1.03
Ubr1-201ENSMUST00000028728 Prr15Q9D1T5 122 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms