RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
PHGDH-232ENST00000641947 CA1P00915 261 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-232ENST00000641947 CSN3P07498 182 aa13.23□□□□□ -0.29
PHGDH-232ENST00000641947 RAB5AP20339 215 aa13.23□□□□□ -0.29
PHGDH-232ENST00000641947 ZFP30Q9Y2G7 519 aa13.23□□□□□ -0.29
PHGDH-232ENST00000641947 SORL1Q92673 2214 aa13.23□□□□□ -0.29
PHGDH-232ENST00000641947 ZNF705DP0CH99 300 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-232ENST00000641947 ZNF705BP0CI00 300 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-232ENST00000641947 BMI1P35226 326 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 CRIP1P50238 77 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 FOXL1Q12952 345 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 WFDC3Q8IUB2 231 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 ZNF738Q8NE65 137 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 PRR25Q96S07 402 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 VWFP04275 2813 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 RBAKDNA6NC62 111 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-232ENST00000641947 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 IL36BQ9NZH7 164 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 ZNF492Q9P255 531 aa13.22□□□□□ -0.29
PHGDH-232ENST00000641947 TRBV24-1A0A075B6N3 115 aa13.21□□□□□ -0.29
PHGDH-232ENST00000641947 A0A1W2PPQ1 181 aa13.21□□□□□ -0.29
PHGDH-232ENST00000641947 TFPI2P48307 235 aa13.21□□□□□ -0.29
PHGDH-232ENST00000641947 CLEC5AQ9NY25 188 aa13.21□□□□□ -0.29
PHGDH-232ENST00000641947 PEMTQ9UBM1 199 aa13.21□□□□□ -0.29
PHGDH-232ENST00000641947 AGRNO00468 2067 aa13.21□□□□□ -0.3
PHGDH-232ENST00000641947 ZNF705GA8MUZ8 300 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-232ENST00000641947 F6UB75 175 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 NSUN5P1Q3KNT7 163 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 IMMP2LQ96T52 175 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 K7EQG2 157 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 ZNF80P51504 273 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-232ENST00000641947 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 FAM210BQ96KR6 192 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 ATRQ13535 2644 aa13.2□□□□□ -0.3
PHGDH-232ENST00000641947 GATCO43716 136 aaKnown RBP13.19□□□□□ -0.3
PHGDH-232ENST00000641947 S100PP25815 95 aa13.19□□□□□ -0.3
PHGDH-232ENST00000641947 MAST4O15021 2626 aa13.18□□□□□ -0.3
PHGDH-232ENST00000641947 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
PHGDH-232ENST00000641947 M0QZ24 198 aa13.18□□□□□ -0.3
PHGDH-232ENST00000641947 TCL1AP56279 114 aa13.18□□□□□ -0.3
PHGDH-232ENST00000641947 SMIM27A0A1W2PRY6 76 aa13.17□□□□□ -0.3
PHGDH-232ENST00000641947 FBLL1A6NHQ2 334 aaKnown RBP13.17□□□□□ -0.3
PHGDH-232ENST00000641947 ZNF688P0C7X2 276 aa13.17□□□□□ -0.3
PHGDH-232ENST00000641947 KCNIP4Q6PIL6 250 aa13.17□□□□□ -0.3
PHGDH-232ENST00000641947 TMEM61Q8N0U2 210 aa13.17□□□□□ -0.3
PHGDH-232ENST00000641947 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
PHGDH-232ENST00000641947 RPS10P46783 165 aaKnown RBP13.17□□□□□ -0.3
PHGDH-232ENST00000641947 RPL19P84098 196 aaKnown RBP13.17□□□□□ -0.3
PHGDH-232ENST00000641947 SAPCD1Q5SSQ6 148 aa13.17□□□□□ -0.3
PHGDH-232ENST00000641947 RPP21Q9H633 154 aaKnown RBP13.17□□□□□ -0.3
PHGDH-232ENST00000641947 OVOL1O14753 267 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 P01737 135 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 ZNF138P52744 262 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 DEFB114Q30KQ6 69 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 TMEM78Q5T7P6 136 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 GDF5OSQ5U4N7 250 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 OR8A1Q8NGG7 326 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 BIN3Q9NQY0 253 aa13.16□□□□□ -0.3
PHGDH-232ENST00000641947 SH2D1AO60880 128 aa13.15□□□□□ -0.3
PHGDH-232ENST00000641947 CT45A10P0DMU9 189 aa13.15□□□□□ -0.3
PHGDH-232ENST00000641947 ID1P41134 155 aa13.15□□□□□ -0.3
PHGDH-232ENST00000641947 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
PHGDH-232ENST00000641947 NDUFA11Q86Y39 141 aa13.15□□□□□ -0.3
PHGDH-232ENST00000641947 FBN1P35555 2871 aaKnown RBP13.15□□□□□ -0.3
PHGDH-232ENST00000641947 GZMBP10144 247 aa13.15□□□□□ -0.31
PHGDH-232ENST00000641947 HIST1H1AQ02539 215 aaPredicted RBP13.15□□□□□ -0.31
PHGDH-232ENST00000641947 PRR9Q5T870 116 aa13.15□□□□□ -0.31
PHGDH-232ENST00000641947 GTSF1Q8WW33 167 aa13.15□□□□□ -0.31
PHGDH-232ENST00000641947 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.31
PHGDH-232ENST00000641947 TRRAPQ9Y4A5 3859 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 A0A1B0GUS0 222 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 TYMSP04818 313 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-232ENST00000641947 SAMD13Q5VXD3 122 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 Q6ZQT7 251 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 ZFP82Q8N141 532 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 DYNLRB2Q8TF09 96 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 DAZAP1Q96EP5 407 aaKnown RBP13.14□□□□□ -0.31
PHGDH-232ENST00000641947 NEU1Q99519 415 aa13.14□□□□□ -0.31
PHGDH-232ENST00000641947 SPINK4O60575 86 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 SMUG1Q53HV7 270 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 CT83Q5H943 113 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 ZNF575Q86XF7 245 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 OR10J6PQ8NGY7 276 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 FAM19A4Q96LR4 140 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 NDFIP1Q9BT67 221 aa13.13□□□□□ -0.31
PHGDH-232ENST00000641947 PHOX2AO14813 284 aa13.12□□□□□ -0.31
PHGDH-232ENST00000641947 NUP35Q8NFH5 326 aa13.12□□□□□ -0.31
PHGDH-232ENST00000641947 OR2D3Q8NGH3 330 aa13.12□□□□□ -0.31
PHGDH-232ENST00000641947 SRD5A3Q9H8P0 318 aa13.12□□□□□ -0.31
PHGDH-232ENST00000641947 TRGC2P03986 189 aa13.12□□□□□ -0.31
PHGDH-232ENST00000641947 CD33P20138 364 aa13.12□□□□□ -0.31
PHGDH-232ENST00000641947 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
PHGDH-232ENST00000641947 LINC00477Q96M19 166 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms