RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
PHGDH-231ENST00000641939 TRAV12-3A0A0B4J271 114 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 A0A1W2PPV4 95 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
PHGDH-231ENST00000641939 RAB2AP61019 212 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 RANP62826 216 aaKnown RBP10.66□□□□□ -0.7
PHGDH-231ENST00000641939 TMEM78Q5T7P6 136 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 PQLC2Q6ZP29 291 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 CCDC28AQ8IWP9 274 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 HSD17B11Q8NBQ5 300 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 OR2T35Q8NGX2 323 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 VGLL1Q99990 258 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 Q9H3A6 140 aa10.66□□□□□ -0.7
PHGDH-231ENST00000641939 TIMM8BQ9Y5J9 83 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-231ENST00000641939 FXYD6-FXYD2A0A087WZ82 144 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 C7orf71A4D174 169 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 KLLNB2CW77 178 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 EIF3GO75821 320 aaKnown RBP eCLIP10.65□□□□□ -0.7
PHGDH-231ENST00000641939 DEFB130BP0DP73 79 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 DEFB130AP0DP74 79 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 CRISP2P16562 243 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 CSN1S1P47710 185 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 OR10G4Q8NGN3 311 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 OR10G9Q8NGN4 311 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 OR10G7Q8NGN6 311 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 OR2G3Q8NGZ4 309 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 PYGO2Q9BRQ0 406 aa10.65□□□□□ -0.7
PHGDH-231ENST00000641939 PSMG3Q9BT73 122 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-231ENST00000641939 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
PHGDH-231ENST00000641939 RNF222A6NCQ9 220 aa10.64□□□□□ -0.71
PHGDH-231ENST00000641939 TNFSF18Q9UNG2 199 aa10.64□□□□□ -0.71
PHGDH-231ENST00000641939 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 GPX1P07203 203 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 NMBP08949 121 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 P0DMU3 169 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 ATP6V0CP27449 155 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
PHGDH-231ENST00000641939 SERF2P84101 59 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 CD300CQ08708 224 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 BTN1A1Q13410 526 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 RXFP4Q8TDU9 374 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 NOP10Q9NPE3 64 aaKnown RBP10.63□□□□□ -0.71
PHGDH-231ENST00000641939 ZNF492Q9P255 531 aa10.63□□□□□ -0.71
PHGDH-231ENST00000641939 TRBV7-9A0A0J9YWB2 115 aa10.62□□□□□ -0.71
PHGDH-231ENST00000641939 HMGB3O15347 200 aaKnown RBP10.62□□□□□ -0.71
PHGDH-231ENST00000641939 ZNF324O75467 553 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-231ENST00000641939 MBP02144 154 aa10.62□□□□□ -0.71
PHGDH-231ENST00000641939 CDC34P49427 236 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-231ENST00000641939 ZNF138P52744 262 aa10.62□□□□□ -0.71
PHGDH-231ENST00000641939 TMEM88Q6PEY1 159 aa10.62□□□□□ -0.71
PHGDH-231ENST00000641939 ZFAND2AQ8N6M9 145 aa10.62□□□□□ -0.71
PHGDH-231ENST00000641939 OTORQ9NRC9 128 aa10.62□□□□□ -0.71
PHGDH-231ENST00000641939 DNAH10Q8IVF4 4471 aa10.62□□□□□ -0.71
PHGDH-231ENST00000641939 BORCS7-ASMTA0A0B4J1R7 106 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 CBY3A6NI87 242 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 SNURFLB1AK76 121 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 DIRC3C9JPN6 131 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 G3V3Q6 166 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 ATP5G1P05496 136 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 ATP5G3P48201 142 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 FAM74A1Q5RGS3 127 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 RPL7L1Q6DKI1 246 aaKnown RBP10.61□□□□□ -0.71
PHGDH-231ENST00000641939 Q8TAT8 98 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 CMTM2Q8TAZ6 248 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 GNPNAT1Q96EK6 184 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-231ENST00000641939 HYLS1Q96M11 299 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 SH3BGRL3Q9H299 93 aa10.61□□□□□ -0.71
PHGDH-231ENST00000641939 PGPA6NDG6 321 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 F5H768 121 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 STAG3L2P0CL84 134 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 STAG3L3P0CL85 134 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 ARL14EPLP0DKL9 152 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 PRR9Q5T870 116 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 POM121L12Q8N7R1 296 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 ZNF680Q8NEM1 530 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 RAB24Q969Q5 203 aa10.6□□□□□ -0.71
PHGDH-231ENST00000641939 ANXA2RQ3ZCQ2 193 aa10.59□□□□□ -0.71
PHGDH-231ENST00000641939 EIF4E3Q8N5X7 224 aaKnown RBP10.59□□□□□ -0.71
PHGDH-231ENST00000641939 LINC00612Q8N6U2 182 aa10.59□□□□□ -0.71
PHGDH-231ENST00000641939 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
PHGDH-231ENST00000641939 NACAE9PAV3 2078 aa10.59□□□□□ -0.71
PHGDH-231ENST00000641939 MUC4Q99102 2169 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 TAAR5O14804 337 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 RGS13O14921 159 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
PHGDH-231ENST00000641939 ARL6IP6Q8N6S5 226 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 C11orf72Q8NBR9 251 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 TMED6Q8WW62 240 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 ACTR3CQ9C0K3 210 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-231ENST00000641939 GSN-AS1Q9NRJ2 163 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 LENEPQ9Y5L5 61 aa10.58□□□□□ -0.72
PHGDH-231ENST00000641939 IGHV1OR15-1A0A075B7D0 117 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 GAGE12BA1L429 117 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 ARPC5O15511 151 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 GAGE7O76087 117 aa10.57□□□□□ -0.72
PHGDH-231ENST00000641939 GAGE12FP0CL80 117 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms