RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 ZNF48Q96MX3 618 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-223ENST00000641597 A0A087X0K7 114 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 NPYP01303 97 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 FAM104BQ5XKR9 115 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 PRELID3AQ96N28 172 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 TMEM191AQ9H0A3 160 aa13.01□□□□□ -0.33
PHGDH-223ENST00000641597 NUDT3O95989 172 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 PSG9Q00887 426 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 IL17RELQ6ZVW7 336 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 ZNF502Q8TBZ5 544 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 ZFAND3Q9H8U3 227 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 CSPG4Q6UVK1 2322 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 CLPSL1A2RUU4 121 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 ZANQ9Y493 2812 aa13□□□□□ -0.33
PHGDH-223ENST00000641597 IGHV2-70DA0A0C4DH43 119 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 GATA1P15976 413 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-223ENST00000641597 C20orf202A1L168 122 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 MINOS1Q5TGZ0 78 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 FER1L6-AS1Q8NA97 138 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 ST20Q9HBF5 79 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 SCRT2Q9NQ03 307 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 HSPB8Q9UJY1 196 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 MINOS1-NBL1R4GNA1 71 aa12.99□□□□□ -0.33
PHGDH-223ENST00000641597 BUB3O43684 328 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 LMO4P61968 165 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 LINC01545Q5VT33 79 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 PRSS57Q6UWY2 283 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 C1orf122Q6ZSJ8 110 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 GATD1Q8NB37 220 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-223ENST00000641597 PET117Q6UWS5 81 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 BRD3OSQ6XYD6 125 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
PHGDH-223ENST00000641597 EVI2AP22794 236 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 DEFB1P60022 68 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 SLC25A34Q6PIV7 304 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 PSMG3-AS1Q96PY0 264 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 SPRY2O43597 315 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 CKS2P33552 79 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 ORMDL3Q8N138 153 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 COX11Q9Y6N1 276 aa12.97□□□□□ -0.33
PHGDH-223ENST00000641597 UBE2E1P51965 193 aa12.96□□□□□ -0.33
PHGDH-223ENST00000641597 ANKRD39Q53RE8 183 aa12.96□□□□□ -0.33
PHGDH-223ENST00000641597 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.33
PHGDH-223ENST00000641597 FAM110DQ8TAY7 271 aaPredicted RBP12.96□□□□□ -0.33
PHGDH-223ENST00000641597 C18orf15Q96N68 181 aa12.96□□□□□ -0.33
PHGDH-223ENST00000641597 POLQO75417 2590 aa12.96□□□□□ -0.33
PHGDH-223ENST00000641597 HSBP1L1C9JCN9 74 aa12.96□□□□□ -0.34
PHGDH-223ENST00000641597 Q6AWC8 147 aa12.96□□□□□ -0.34
PHGDH-223ENST00000641597 IGLC6P0CF74 106 aa12.95□□□□□ -0.34
PHGDH-223ENST00000641597 CACNG7P62955 275 aa12.95□□□□□ -0.34
PHGDH-223ENST00000641597 J3KRW8 73 aa12.95□□□□□ -0.34
PHGDH-223ENST00000641597 PTTG1IPP53801 180 aa12.95□□□□□ -0.34
PHGDH-223ENST00000641597 UCNP55089 124 aa12.95□□□□□ -0.34
PHGDH-223ENST00000641597 BVES-AS1Q5T3Y7 98 aa12.95□□□□□ -0.34
PHGDH-223ENST00000641597 U3KQK5 164 aa12.95□□□□□ -0.34
PHGDH-223ENST00000641597 PIEZO1Q92508 2521 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 CENPVL3A0A0U1RRI6 287 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 OOSP1A8MZH6 123 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 AGPAT4-IT1Q9H0P7 198 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 TRAV8-2A0A0B4J237 113 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 TRBV12-3P01733 135 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 IGF1P05019 195 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 EFNA4P52798 201 aa12.94□□□□□ -0.34
PHGDH-223ENST00000641597 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 A0A1B0GW15 77 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 S100A7AQ86SG5 101 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 USP9YO00507 2555 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-223ENST00000641597 MYO18BQ8IUG5 2567 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 CBY3A6NI87 242 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 NPFFO15130 113 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 TRGV3P03979 118 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 PAX8Q06710 450 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 C2orf91Q6ZV80 131 aa12.93□□□□□ -0.34
PHGDH-223ENST00000641597 LCNL1Q6ZST4 164 aa12.92□□□□□ -0.34
PHGDH-223ENST00000641597 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
PHGDH-223ENST00000641597 ORAOV1Q8WV07 137 aa12.92□□□□□ -0.34
PHGDH-223ENST00000641597 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
PHGDH-223ENST00000641597 TRAV26-2A0A0B4J265 109 aa12.92□□□□□ -0.34
PHGDH-223ENST00000641597 GNLYP22749 145 aa12.92□□□□□ -0.34
PHGDH-223ENST00000641597 COX8CQ7Z4L0 72 aa12.92□□□□□ -0.34
PHGDH-223ENST00000641597 TAX1BP3O14907 124 aa12.91□□□□□ -0.34
PHGDH-223ENST00000641597 ITLN2Q8WWU7 325 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-223ENST00000641597 DKK2Q9UBU2 259 aa12.91□□□□□ -0.34
PHGDH-223ENST00000641597 ZFYVE26Q68DK2 2539 aa12.91□□□□□ -0.34
PHGDH-223ENST00000641597 FABP5P3A8MUU1 101 aa12.91□□□□□ -0.34
PHGDH-223ENST00000641597 C5orf56Q8N8D9 126 aa12.91□□□□□ -0.34
PHGDH-223ENST00000641597 GOSR1O95249 250 aa12.9□□□□□ -0.34
PHGDH-223ENST00000641597 IGHV4-39P01824 125 aa12.9□□□□□ -0.34
PHGDH-223ENST00000641597 BMI1P35226 326 aa12.9□□□□□ -0.34
PHGDH-223ENST00000641597 LY6EQ16553 131 aa12.9□□□□□ -0.34
PHGDH-223ENST00000641597 UNQ9165/PRO28630Q6UXU0 137 aa12.9□□□□□ -0.34
PHGDH-223ENST00000641597 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
PHGDH-223ENST00000641597 SPOCK3Q9BQ16 436 aa12.9□□□□□ -0.34
PHGDH-223ENST00000641597 CUBNO60494 3623 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms