RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
PHGDH-221ENST00000641573 OR10G8Q8NGN5 311 aa9.88□□□□□ -0.83
PHGDH-221ENST00000641573 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
PHGDH-221ENST00000641573 C20orf173Q96LM9 149 aa9.88□□□□□ -0.83
PHGDH-221ENST00000641573 MLXQ9UH92 298 aa9.88□□□□□ -0.83
PHGDH-221ENST00000641573 CMYA5Q8N3K9 4069 aa9.88□□□□□ -0.83
PHGDH-221ENST00000641573 KMT2CQ8NEZ4 4911 aaKnown RBP9.87□□□□□ -0.83
PHGDH-221ENST00000641573 CXorf65A6NEN9 183 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 FBLL1A6NHQ2 334 aaKnown RBP9.87□□□□□ -0.83
PHGDH-221ENST00000641573 CSN3P07498 182 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 ERVFC1-1P60608 527 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 NSUN5P1Q3KNT7 163 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 TMEM183AQ8IXX5 376 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 GBGT1Q8N5D6 347 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 VGLL1Q99990 258 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 MLST8Q9BVC4 326 aa9.87□□□□□ -0.83
PHGDH-221ENST00000641573 RBAKDNA6NC62 111 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 ID1P41134 155 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 NDUFA11Q86Y39 141 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 WFDC3Q8IUB2 231 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 C15orf54Q8N8G6 183 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 ZNF738Q8NE65 137 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 ASCL2Q99929 193 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 CITED1Q99966 193 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 MS4A6AQ9H2W1 248 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 OSTCQ9NRP0 149 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 ZFP30Q9Y2G7 519 aa9.86□□□□□ -0.83
PHGDH-221ENST00000641573 COLCA2A8K830 154 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 OVOL1O14753 267 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 TFPI2P48307 235 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 ERCC8Q13216 396 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 PRR27Q6MZM9 219 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 RNASE7Q9H1E1 156 aaKnown RBP9.85□□□□□ -0.83
PHGDH-221ENST00000641573 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 URGCP-MRPS24S4R325 110 aa9.85□□□□□ -0.83
PHGDH-221ENST00000641573 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
PHGDH-221ENST00000641573 IBA57Q5T440 356 aaKnown RBP9.84□□□□□ -0.83
PHGDH-221ENST00000641573 FAM231DQ6ZW35 169 aa9.84□□□□□ -0.83
PHGDH-221ENST00000641573 FAM24BQ8N5W8 94 aa9.84□□□□□ -0.83
PHGDH-221ENST00000641573 DYNLRB2Q8TF09 96 aa9.84□□□□□ -0.83
PHGDH-221ENST00000641573 ZNF492Q9P255 531 aa9.84□□□□□ -0.83
PHGDH-221ENST00000641573 K7EQG2 157 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 GATCO43716 136 aaKnown RBP9.83□□□□□ -0.84
PHGDH-221ENST00000641573 PFN1P07737 140 aaKnown RBP9.83□□□□□ -0.84
PHGDH-221ENST00000641573 S100PP25815 95 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 PAFAH1B2P68402 229 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 ELOBQ15370 118 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 NUDT10Q8NFP7 164 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 Q8TAT8 98 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 NUDT11Q96G61 164 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 C8orf49Q96NF6 230 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 PRR25Q96S07 402 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 AGPAT4-IT1Q9H0P7 198 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 V9GYV3 84 aa9.83□□□□□ -0.84
PHGDH-221ENST00000641573 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 ZNF705GA8MUZ8 300 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-221ENST00000641573 ZNF138P52744 262 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 DEFB114Q30KQ6 69 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 TMEM78Q5T7P6 136 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 KCNIP4Q6PIL6 250 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 LINC00322Q6ZN03 302 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-221ENST00000641573 RBPMS2Q6ZRY4 209 aaKnown RBP9.82□□□□□ -0.84
PHGDH-221ENST00000641573 C9orf47Q6ZRZ4 202 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 ZC2HC1AQ96GY0 325 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 IMMP2LQ96T52 175 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 NDFIP1Q9BT67 221 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 IL36BQ9NZH7 164 aa9.82□□□□□ -0.84
PHGDH-221ENST00000641573 RYR3Q15413 4870 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 C19orf71A6NCJ1 209 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 CXCL1P09341 107 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 ZNF688P0C7X2 276 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 ZNF705DP0CH99 300 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-221ENST00000641573 ZNF705BP0CI00 300 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-221ENST00000641573 DEFB1P60022 68 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 COX8CQ7Z4L0 72 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 OR8A1Q8NGG7 326 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 DAZAP1Q96EP5 407 aaKnown RBP9.81□□□□□ -0.84
PHGDH-221ENST00000641573 GPR61Q9BZJ8 451 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 SIGLEC8Q9NYZ4 499 aa9.81□□□□□ -0.84
PHGDH-221ENST00000641573 TRAV2A0A0B4J234 112 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 F6UB75 175 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 P01737 135 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 CT45A10P0DMU9 189 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 CRIP1P50238 77 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 FAM3BP58499 235 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-221ENST00000641573 SNRPD3P62318 126 aaKnown RBP9.8□□□□□ -0.84
PHGDH-221ENST00000641573 HIST1H1AQ02539 215 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-221ENST00000641573 CD300EQ496F6 205 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-221ENST00000641573 PSMG4Q5JS54 123 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 TMEM61Q8N0U2 210 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 LINC00477Q96M19 166 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 PPP1R14DQ9NXH3 145 aa9.8□□□□□ -0.84
PHGDH-221ENST00000641573 TRBV24-1A0A075B6N3 115 aa9.79□□□□□ -0.84
PHGDH-221ENST00000641573 TRAV25A0A0B4J276 109 aa9.79□□□□□ -0.84
PHGDH-221ENST00000641573 A0A1W2PPQ1 181 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms