RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 BTN1A1Q13410 526 aa9.69□□□□□ -0.86
LINC00339-211ENST00000641009 SSX7Q7RTT5 188 aa9.69□□□□□ -0.86
LINC00339-211ENST00000641009 GNPNAT1Q96EK6 184 aaPredicted RBP9.69□□□□□ -0.86
LINC00339-211ENST00000641009 SLC25A2Q9BXI2 301 aa9.69□□□□□ -0.86
LINC00339-211ENST00000641009 RYR1P21817 5038 aa9.69□□□□□ -0.86
LINC00339-211ENST00000641009 SLC25A5P05141 298 aaKnown RBP9.68□□□□□ -0.86
LINC00339-211ENST00000641009 M6PRP20645 277 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 TNP2Q05952 138 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 CD300CQ08708 224 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 PDE6HQ13956 83 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 Q6ZTI0 123 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 MIR17HGQ75NE6 70 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 AGPAT4-IT1Q9H0P7 198 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 TMPRSS5Q9H3S3 457 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 PRELID1Q9Y255 219 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 HSPG2P98160 4391 aa9.68□□□□□ -0.86
LINC00339-211ENST00000641009 IGKV2-40A0A087WW87 121 aaPredicted RBP9.67□□□□□ -0.86
LINC00339-211ENST00000641009 KLLNB2CW77 178 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 E5RGE8 158 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 H0YIZ8 118 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 UPK1BO75841 260 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 IGKV2D-40P01614 121 aaPredicted RBP9.67□□□□□ -0.86
LINC00339-211ENST00000641009 DAZ2Q13117 558 aaKnown RBP9.67□□□□□ -0.86
LINC00339-211ENST00000641009 ICAM4Q14773 271 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 FAM122CQ6P4D5 195 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 C6orf223Q8N319 242 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 RXFP4Q8TDU9 374 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 FAM167A-AS1Q96KT0 104 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 NMES1Q9C002 83 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 SLC25A31Q9H0C2 315 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 AAMDCQ9H7C9 122 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 GSN-AS1Q9NRJ2 163 aa9.67□□□□□ -0.86
LINC00339-211ENST00000641009 LRP1BQ9NZR2 4599 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 ZNF324O75467 553 aaPredicted RBP9.66□□□□□ -0.86
LINC00339-211ENST00000641009 RNASE4P34096 147 aaKnown RBP9.66□□□□□ -0.86
LINC00339-211ENST00000641009 IFITM3Q01628 133 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 Q6ZNX1 250 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 C11orf72Q8NBR9 251 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 PRR9Q5T870 116 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 Q6ZQT7 251 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 ZNF503Q96F45 646 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 VGLL1Q99990 258 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 WDR61Q9GZS3 305 aaKnown RBP9.66□□□□□ -0.86
LINC00339-211ENST00000641009 Q9H8V8 135 aa9.66□□□□□ -0.86
LINC00339-211ENST00000641009 GPX1P07203 203 aa9.65□□□□□ -0.87
LINC00339-211ENST00000641009 OR10J4P0C629 311 aa9.65□□□□□ -0.87
LINC00339-211ENST00000641009 NBEAP1P0C6P0 100 aa9.65□□□□□ -0.87
LINC00339-211ENST00000641009 CRISP2P16562 243 aa9.65□□□□□ -0.87
LINC00339-211ENST00000641009 ESRGQ1W209 222 aa9.65□□□□□ -0.87
LINC00339-211ENST00000641009 EIF4E3Q8N5X7 224 aaKnown RBP9.65□□□□□ -0.87
LINC00339-211ENST00000641009 ZNF680Q8NEM1 530 aa9.65□□□□□ -0.87
LINC00339-211ENST00000641009 OR51M1Q9H341 326 aa9.65□□□□□ -0.87
LINC00339-211ENST00000641009 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 TRGV1A0A0A0MS02 117 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 INMT-MINDY4F8WBC2 141 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 PRAF2O60831 178 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 H2BFSP57053 126 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 ANXA2RQ3ZCQ2 193 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 TMEM78Q5T7P6 136 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 ZFAND2AQ8N6M9 145 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 FXYD5Q96DB9 178 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 PHYHIPLQ96FC7 376 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 LINC00467Q9BRT7 94 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 PAXXQ9BUH6 204 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
LINC00339-211ENST00000641009 H3BNG1 76 aa9.63□□□□□ -0.87
LINC00339-211ENST00000641009 CYCSP99999 105 aaKnown RBP9.63□□□□□ -0.87
LINC00339-211ENST00000641009 Q8TAT8 98 aa9.63□□□□□ -0.87
LINC00339-211ENST00000641009 PPP1R1CQ8WVI7 109 aa9.63□□□□□ -0.87
LINC00339-211ENST00000641009 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
LINC00339-211ENST00000641009 MRPL32Q9BYC8 188 aaKnown RBP9.63□□□□□ -0.87
LINC00339-211ENST00000641009 KCNIP2Q9NS61 270 aa9.63□□□□□ -0.87
LINC00339-211ENST00000641009 ZNF492Q9P255 531 aa9.63□□□□□ -0.87
LINC00339-211ENST00000641009 FUT9Q9Y231 359 aa9.63□□□□□ -0.87
LINC00339-211ENST00000641009 OR7C2O60412 319 aa9.62□□□□□ -0.87
LINC00339-211ENST00000641009 TCL1AP56279 114 aa9.62□□□□□ -0.87
LINC00339-211ENST00000641009 UPK3BQ9BT76 320 aa9.62□□□□□ -0.87
LINC00339-211ENST00000641009 ABCA13Q86UQ4 5058 aa9.62□□□□□ -0.87
LINC00339-211ENST00000641009 A0A096LPF7 62 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 C16orf90A8MZG2 172 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 C17orf112F2Z3M2 114 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 RGS13O14921 159 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 SPINK4O60575 86 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 NMBP08949 121 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 C18orf15Q96N68 181 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 ATP5SQ99766 215 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 MARVELD1Q9BSK0 173 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 Q9H3A6 140 aa9.61□□□□□ -0.87
LINC00339-211ENST00000641009 MRPS16Q9Y3D3 137 aaKnown RBP9.61□□□□□ -0.87
LINC00339-211ENST00000641009 IGHV1OR15-1A0A075B7D0 117 aa9.6□□□□□ -0.87
LINC00339-211ENST00000641009 ZNF138P52744 262 aa9.6□□□□□ -0.87
LINC00339-211ENST00000641009 RANP62826 216 aaKnown RBP9.6□□□□□ -0.87
LINC00339-211ENST00000641009 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
LINC00339-211ENST00000641009 FFAR4Q5NUL3 377 aa9.6□□□□□ -0.87
LINC00339-211ENST00000641009 IBA57Q5T440 356 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms