RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 OR11H2Q8NH07 326 aa9.59□□□□□ -0.87
GTF3A-209ENST00000640289 Q8TAT8 98 aa9.59□□□□□ -0.87
GTF3A-209ENST00000640289 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
GTF3A-209ENST00000640289 IGHV3OR16-12A0A075B7B8 117 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 RBAKDNA6NC62 111 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 PAGE4O60829 102 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 TCRAP04437 139 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 RBMY1A1P0DJD3 496 aaKnown RBP9.58□□□□□ -0.88
GTF3A-209ENST00000640289 RBMY1CP0DJD4 496 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 CDKN1BP46527 198 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 ATP5G3P48201 142 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 RBMY1FQ15415 496 aaKnown RBP9.58□□□□□ -0.88
GTF3A-209ENST00000640289 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 SGK494Q96LW2 274 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 IGF2BP2-AS1Q96M15 143 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 ZNF492Q9P255 531 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 EPDR1Q9UM22 224 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 X6R8D5 127 aa9.58□□□□□ -0.88
GTF3A-209ENST00000640289 TRAV8-1A0A0A6YYK1 113 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 TRAV1-1A0A0B4J248 108 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 INSP01308 110 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 IFNA7P01567 189 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 AMBPP02760 352 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 LEPP41159 167 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 ZNF138P52744 262 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 CST9LP1Q5W188 147 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
GTF3A-209ENST00000640289 ARL6IP6Q8N6S5 226 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
GTF3A-209ENST00000640289 HBE1P02100 147 aa9.56□□□□□ -0.88
GTF3A-209ENST00000640289 TSPOP30536 169 aa9.56□□□□□ -0.88
GTF3A-209ENST00000640289 PRR9Q5T870 116 aa9.56□□□□□ -0.88
GTF3A-209ENST00000640289 GFI1BQ5VTD9 330 aa9.56□□□□□ -0.88
GTF3A-209ENST00000640289 CCDC28AQ8IWP9 274 aa9.56□□□□□ -0.88
GTF3A-209ENST00000640289 GNG13Q9P2W3 67 aa9.56□□□□□ -0.88
GTF3A-209ENST00000640289 A0A0J9YWU9 116 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 DEFB4AO15263 64 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 PRM2P04554 102 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 BLOC1S1P78537 153 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 TEX261Q6UWH6 196 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 ZFAND2AQ8N6M9 145 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 CYB561D1Q8N8Q1 229 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 ATG101Q9BSB4 218 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 NKX6-2Q9C056 277 aaPredicted RBP9.55□□□□□ -0.88
GTF3A-209ENST00000640289 EDA2RQ9HAV5 297 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 GOLT1BQ9Y3E0 138 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 ARL2-SNX15V9GYD0 113 aa9.55□□□□□ -0.88
GTF3A-209ENST00000640289 TRAV12-3A0A0B4J271 114 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 IGHV4-28A0A0C4DH34 117 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 SERTM2A0A1B0GWG4 89 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 KLLNB2CW77 178 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 TEX46H3BTG2 121 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 PEX7O00628 323 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 IGLV2-11P01706 119 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 GPX1P07203 203 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 CRISP2P16562 243 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 RNASE4P34096 147 aaKnown RBP9.54□□□□□ -0.88
GTF3A-209ENST00000640289 PPT1P50897 306 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 BTN1A1Q13410 526 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 Q6ZQT7 251 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 Q8NAQ8 132 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 PCNPQ8WW12 178 aaKnown RBP9.54□□□□□ -0.88
GTF3A-209ENST00000640289 TVP23CQ96ET8 276 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 TMEM208Q9BTX3 173 aa9.54□□□□□ -0.88
GTF3A-209ENST00000640289 C11orf94C9JXX5 98 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 K7EQM0 130 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 MIFP14174 115 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 FLI1Q01543 452 aaPredicted RBP9.53□□□□□ -0.88
GTF3A-209ENST00000640289 TMEM75Q8N9X5 138 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 HIST1H2BAQ96A08 127 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 LINC01587Q99440 93 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 NEU1Q99519 415 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 MANBALQ9NQG1 85 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 PSG8Q9UQ74 426 aa9.53□□□□□ -0.88
GTF3A-209ENST00000640289 TRBV7-9A0A0J9YWB2 115 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 C7orf71A4D174 169 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 ZNF705GA8MUZ8 300 aaPredicted RBP9.52□□□□□ -0.89
GTF3A-209ENST00000640289 F6UZH7 168 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 PRNTQ86SH4 94 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 ZNF680Q8NEM1 530 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 LYPD6BQ8NI32 183 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 C8orf49Q96NF6 230 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
GTF3A-209ENST00000640289 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
GTF3A-209ENST00000640289 NMBP08949 121 aa9.51□□□□□ -0.89
GTF3A-209ENST00000640289 HTN1P15515 57 aa9.51□□□□□ -0.89
GTF3A-209ENST00000640289 AZU1P20160 251 aa9.51□□□□□ -0.89
GTF3A-209ENST00000640289 C20orf144Q9BQM9 153 aa9.51□□□□□ -0.89
GTF3A-209ENST00000640289 NIPSNAP3BQ9BS92 247 aa9.51□□□□□ -0.89
GTF3A-209ENST00000640289 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
GTF3A-209ENST00000640289 TREM1Q9NP99 234 aa9.51□□□□□ -0.89
GTF3A-209ENST00000640289 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 H7BYZ3 331 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 IFNA1P01562 189 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 BCL2P10415 239 aa9.5□□□□□ -0.89
GTF3A-209ENST00000640289 AKR1C3P42330 323 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms