RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	SFRP2	Q96HF1	295 aa		7.88	□□□□□ -1.15
NECAP1-223	ENST00000640091	RNASE7	Q9H1E1	156 aa	Known RBP	7.88	□□□□□ -1.15
NECAP1-223	ENST00000640091	URGCP-MRPS24	S4R325	110 aa		7.88	□□□□□ -1.15
NECAP1-223	ENST00000640091	OVOL1	O14753	267 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	MT-ND4L	P03901	98 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	ERVFC1-1	P60608	527 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091		Q86TA4	180 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	TMEM75	Q8N9X5	138 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	ZNF738	Q8NE65	137 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091		Q8TAT8	98 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	LY96	Q9Y6Y9	160 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091		A0A087WWC5	75 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	C1orf196	B1AJZ1	125 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091		F6UB75	175 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	GCG	P01275	180 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	LINC00322	Q6ZN03	302 aa	Predicted RBP	7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	NDUFA11	Q86Y39	141 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	MLST8	Q9BVC4	326 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	SMCO4	Q9NRQ5	59 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	PPP1R14D	Q9NXH3	145 aa		7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	FBN1	P35555	2871 aa	Known RBP	7.87	□□□□□ -1.15
NECAP1-223	ENST00000640091	FABP9	Q0Z7S8	132 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	DEFB114	Q30KQ6	69 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	KRTAP24-1	Q3LI83	254 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	PRIMA1	Q86XR5	153 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	TMEM61	Q8N0U2	210 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	DYNLRB2	Q8TF09	96 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	C8orf49	Q96NF6	230 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	AGPAT4-IT1	Q9H0P7	198 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091	SORL1	Q92673	2214 aa		7.86	□□□□□ -1.15
NECAP1-223	ENST00000640091		H7BYZ3	331 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	ZNF688	P0C7X2	276 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	CD300E	Q496F6	205 aa	Predicted RBP	7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	TMEM183A	Q8IXX5	376 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	OR10G8	Q8NGN5	311 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	GPR61	Q9BZJ8	451 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	TUBA4B	Q9H853	241 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	SERTM2	A0A1B0GWG4	89 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	PSMG4	Q5JS54	123 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	IBA57	Q5T440	356 aa	Known RBP	7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	ARL6IP6	Q8N6S5	226 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	ANAPC16	Q96DE5	110 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	CTDSP1	Q9GZU7	261 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	TMEM242	Q9NWH2	141 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	ZFP30	Q9Y2G7	519 aa		7.85	□□□□□ -1.15
NECAP1-223	ENST00000640091	IZUMO1R	A6ND01	250 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091		K7EQG2	157 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	CA1	P00915	261 aa	Predicted RBP	7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	ID1	P41134	155 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	PAFAH1B2	P68402	229 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	NUDT10	Q8NFP7	164 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	NUDT11	Q96G61	164 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	ZC2HC1A	Q96GY0	325 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	PRR25	Q96S07	402 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	CLEC5A	Q9NY25	188 aa		7.84	□□□□□ -1.15
NECAP1-223	ENST00000640091	SAP30	O75446	220 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	PF4	P02776	101 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	CD33	P20138	364 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	CRIP1	P50238	77 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	FAM3B	P58499	235 aa	Predicted RBP	7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	DEFA6	Q01524	100 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	ELOB	Q15370	118 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	GDF5OS	Q5U4N7	250 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	MRPL53	Q96EL3	112 aa	Known RBP	7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	C14orf144	Q96I85	54 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	CITED1	Q99966	193 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091		V9GYV3	84 aa		7.84	□□□□□ -1.16
NECAP1-223	ENST00000640091	TRBV6-1	A0A0K0K1D8	114 aa		7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	RBAKDN	A6NC62	111 aa		7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	SNRPD3	P62318	126 aa	Known RBP	7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	HIST1H1A	Q02539	215 aa	Predicted RBP	7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	TMEM78	Q5T7P6	136 aa		7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	SPATA3	Q8NHX4	192 aa		7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	SMIM12	Q96EX1	92 aa		7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	TRRAP	Q9Y4A5	3859 aa		7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	VWF	P04275	2813 aa		7.83	□□□□□ -1.16
NECAP1-223	ENST00000640091	TGIF2-C20orf24	A0A0A6YYL0	155 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	CXorf65	A6NEN9	183 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	SAPCD1	Q5SSQ6	148 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	DNLZ	Q5SXM8	178 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	C9orf47	Q6ZRZ4	202 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	OR8A1	Q8NGG7	326 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	OR10J6P	Q8NGY7	276 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	OSTC	Q9NRP0	149 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091		J3KRW8	73 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	PPP1R2P9	O14990	202 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	PFN1	P07737	140 aa	Known RBP	7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	CXCL1	P09341	107 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	ZNF80	P51504	273 aa	Predicted RBP	7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	ZNF138	P52744	262 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	DAZAP1	Q96EP5	407 aa	Known RBP	7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	ZNF492	Q9P255	531 aa		7.82	□□□□□ -1.16
NECAP1-223	ENST00000640091	IGKV3-20	P01619	116 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	CT45A10	P0DMU9	189 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	LBH	Q53QV2	105 aa	Predicted RBP	7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	PYY3	Q5JQD4	70 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	LINC00482	Q8N8I6	264 aa		7.81	□□□□□ -1.16
NECAP1-223	ENST00000640091	YPEL4	Q96NS1	127 aa		7.81	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms