RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 HSBP1O75506 76 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 NTF3P20783 257 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 PRR31Q5SQ13 230 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 SAPCD1Q5SSQ6 148 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 A0A087X0K7 114 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 CLPSL1A2RUU4 121 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 Q6AWC8 147 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 Q8N976 141 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 PRR25Q96S07 402 aa11.63□□□□□ -0.55
TRIM3-215ENST00000639856 SONP18583 2426 aaKnown RBP11.62□□□□□ -0.55
TRIM3-215ENST00000639856 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
TRIM3-215ENST00000639856 IGHG2P01859 326 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 ARMS2P0C7Q2 107 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
TRIM3-215ENST00000639856 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 RIGQ13278 110 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 TDRG1Q3Y452 100 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 IGFL4Q6B9Z1 124 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 ATP6V0BQ99437 205 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 NDFIP1Q9BT67 221 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 M0QZK8 103 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 IGF1P05019 195 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 FAM162BQ5T6X4 162 aa11.62□□□□□ -0.55
TRIM3-215ENST00000639856 RNASEKQ6P5S7 137 aaKnown RBP11.62□□□□□ -0.55
TRIM3-215ENST00000639856 FASNP49327 2511 aaKnown RBP11.61□□□□□ -0.55
TRIM3-215ENST00000639856 FAM223BA6NKX1 122 aa11.61□□□□□ -0.55
TRIM3-215ENST00000639856 C3orf79P0CE67 100 aa11.61□□□□□ -0.55
TRIM3-215ENST00000639856 LBHQ53QV2 105 aaPredicted RBP11.61□□□□□ -0.55
TRIM3-215ENST00000639856 CYB5R2Q6BCY4 276 aa11.61□□□□□ -0.55
TRIM3-215ENST00000639856 LCN12Q6JVE5 192 aa11.61□□□□□ -0.55
TRIM3-215ENST00000639856 FAM223AQ8IWN6 122 aa11.61□□□□□ -0.55
TRIM3-215ENST00000639856 GATD1Q8NB37 220 aa11.61□□□□□ -0.55
TRIM3-215ENST00000639856 BORCS7Q96B45 105 aa11.61□□□□□ -0.55
TRIM3-215ENST00000639856 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.6□□□□□ -0.55
TRIM3-215ENST00000639856 A0A1B0GW15 77 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 SMAD7O15105 426 aaKnown RBP11.6□□□□□ -0.55
TRIM3-215ENST00000639856 SH2D1AO60880 128 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 TMEM95Q3KNT9 176 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 VGLL1Q99990 258 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 VAMP8Q9BV40 100 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 TMEM189A5PLL7 270 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 METTL26Q96S19 204 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 SLC50A1Q9BRV3 221 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 ACANP16112 2415 aa11.6□□□□□ -0.55
TRIM3-215ENST00000639856 M0R2Z0 102 aa11.59□□□□□ -0.55
TRIM3-215ENST00000639856 TRGV3P03979 118 aa11.59□□□□□ -0.55
TRIM3-215ENST00000639856 PPIFP30405 207 aaKnown RBP11.59□□□□□ -0.55
TRIM3-215ENST00000639856 Q8TAT8 98 aa11.59□□□□□ -0.55
TRIM3-215ENST00000639856 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
TRIM3-215ENST00000639856 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
TRIM3-215ENST00000639856 ZNF124Q15973 351 aa11.59□□□□□ -0.55
TRIM3-215ENST00000639856 LCNL1Q6ZST4 164 aa11.59□□□□□ -0.55
TRIM3-215ENST00000639856 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.56
TRIM3-215ENST00000639856 BMI1P35226 326 aa11.58□□□□□ -0.56
TRIM3-215ENST00000639856 C9orf139Q6ZV77 190 aa11.58□□□□□ -0.56
TRIM3-215ENST00000639856 IL17RELQ6ZVW7 336 aa11.58□□□□□ -0.56
TRIM3-215ENST00000639856 CHCHD1Q96BP2 118 aaKnown RBP11.58□□□□□ -0.56
TRIM3-215ENST00000639856 TPPP3Q9BW30 176 aa11.58□□□□□ -0.56
TRIM3-215ENST00000639856 U3KQE9 123 aa11.58□□□□□ -0.56
TRIM3-215ENST00000639856 FAM181BA6NEQ2 426 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 KLK15Q9H2R5 256 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 IGHV3OR16-13A0A075B7E8 117 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 TMSB15BA0A087X1C1 80 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 IGHV3-74A0A0B4J1X5 117 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 M0QZ24 198 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 ZNF207O43670 478 aaKnown RBP11.57□□□□□ -0.56
TRIM3-215ENST00000639856 ZNF80P51504 273 aaPredicted RBP11.57□□□□□ -0.56
TRIM3-215ENST00000639856 LYZL1Q6UWQ5 148 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 Q6YL49 198 aa11.57□□□□□ -0.56
TRIM3-215ENST00000639856 BRI3O95415 125 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 LINC00614P0C842 121 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 ZNF493Q6ZR52 646 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 RNF182Q8N6D2 247 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 IGHV3-49A0A0A0MS15 119 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 PRAC2D3DTV9 90 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 HOXA3O43365 443 aaPredicted RBP11.56□□□□□ -0.56
TRIM3-215ENST00000639856 TRBV12-3P01733 135 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 RPS20P60866 119 aaKnown RBP11.56□□□□□ -0.56
TRIM3-215ENST00000639856 DMRTA1Q5VZB9 504 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
TRIM3-215ENST00000639856 C2orf70A6NJV1 201 aa11.55□□□□□ -0.56
TRIM3-215ENST00000639856 H3BUA1 57 aa11.55□□□□□ -0.56
TRIM3-215ENST00000639856 PF4V1P10720 104 aa11.55□□□□□ -0.56
TRIM3-215ENST00000639856 ARL3P36405 182 aa11.55□□□□□ -0.56
TRIM3-215ENST00000639856 ERCC8Q13216 396 aa11.55□□□□□ -0.56
TRIM3-215ENST00000639856 IGHV3-11P01762 117 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 SRSF2Q01130 221 aaKnown RBP11.54□□□□□ -0.56
TRIM3-215ENST00000639856 CFHR3Q02985 330 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 MRPL53Q96EL3 112 aaKnown RBP11.54□□□□□ -0.56
TRIM3-215ENST00000639856 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 MIEN1Q9BRT3 115 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 C2orf88Q9BSF0 95 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 MYO9AB2RTY4 2548 aa11.54□□□□□ -0.56
TRIM3-215ENST00000639856 TRAV8-2A0A0B4J237 113 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms