RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 HIST1H2BBP33778 126 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 C9orf66Q5T8R8 295 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 AMN1Q8IY45 258 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 CFPP27918 469 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 WDR86Q86TI4 376 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 IGHV2-70P01814 119 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 DUX4L9Q6RFH8 374 aaPredicted RBP8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 KLK9Q9UKQ9 250 aa8.2□□□□□ -1.1
KCNQ3-208ENST00000639496 ABCA2Q9BZC7 2435 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 IGHV4-61A0A0C4DH41 118 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 ATRAIDQ6UW56 229 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 C8orf31Q8N9H6 132 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 DEFB104AQ8WTQ1 72 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 LGALS1P09382 135 aaKnown RBP8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 GRNP28799 593 aaKnown RBP8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 KLF12Q9Y4X4 402 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 I3L3M4 83 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 DAZAP2Q15038 168 aaPredicted RBP8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 ZC2HC1BQ5TFG8 222 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
KCNQ3-208ENST00000639496 IGHV3-16A0A0C4DH30 117 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 K7EM74 188 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 TNFRSF6BO95407 300 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 SRSF2Q01130 221 aaKnown RBP8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 WT1-ASQ06250 92 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 HIVEP3Q5T1R4 2406 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 TEX48A0A1B0GUV7 120 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 ZNF503-AS2A6NEH8 195 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 C15orf65H3BRN8 121 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 CT83Q5H943 113 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 TICRRQ7Z2Z1 1910 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 TMEM126AQ9H061 195 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 TMEM14CQ9P0S9 112 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 COL4A6Q14031 1691 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 LURAP1LQ8IV03 231 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 TMEM256Q8N2U0 113 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
KCNQ3-208ENST00000639496 IGHV4-30-2A0A087WSY4 118 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 HOXD3P31249 432 aaPredicted RBP8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 NPC2P61916 151 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 POU2AF1Q16633 256 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 FOXI2Q6ZQN5 318 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 A0A1B0GV90 55 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 MMP23AO75900 390 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 SRSF4Q08170 494 aaKnown RBP8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 FOXE3Q13461 319 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 NEGR1Q7Z3B1 354 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 PRR25Q96S07 402 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 SPAG8Q99932 426 aaPredicted RBP8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 CENPVL3A0A0U1RRI6 287 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 C10orf105Q8TEF2 133 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 NAV3Q8IVL0 2385 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 PRSS46E5RG02 174 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 OR11H6Q8NGC7 330 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 TMEM141Q96I45 108 aa8.17□□□□□ -1.1
KCNQ3-208ENST00000639496 HEATR5AQ86XA9 2040 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 H3BRN7 92 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 IGLC1P0CG04 106 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 RHOHQ15669 191 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 ANK1P16157 1881 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 SMKR1H3BMG3 65 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 LYL1P12980 280 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 THAP8Q8NA92 274 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 IGF2BP2-AS1Q96M15 143 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 C1orf147Q96MC9 270 aaPredicted RBP8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 PYGO2Q9BRQ0 406 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 TRAV12-2A0A075B6T6 113 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 KLF5Q13887 457 aaPredicted RBP8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 BCL6BQ8N143 479 aaPredicted RBP8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 NDUFAF3Q9BU61 184 aa8.16□□□□□ -1.1
KCNQ3-208ENST00000639496 HOXB4P17483 251 aaPredicted RBP8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 TP53TG1Q9Y2A0 90 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 DOCK11Q5JSL3 2073 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 ANGP03950 147 aaKnown RBP8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 GAGE6Q13070 117 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 RSPO1Q2MKA7 263 aaPredicted RBP8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 FAM120AOSQ5T036 256 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 PIFOQ8TCI5 191 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 HIST1H2BLQ99880 126 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 SNHG12Q9BXW3 62 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
KCNQ3-208ENST00000639496 GP9P14770 177 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms