RNA–Protein interactions for RNA: ENST00000639277.1

GFAP-233, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 1,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-233ENST00000639277 C3orf79P0CE67 100 aa12.75□□□□□ -0.37
GFAP-233ENST00000639277 PRB4P10163 310 aaPredicted RBP12.75□□□□□ -0.37
GFAP-233ENST00000639277 PRR25Q96S07 402 aa12.75□□□□□ -0.37
GFAP-233ENST00000639277 SLC50A1Q9BRV3 221 aa12.75□□□□□ -0.37
GFAP-233ENST00000639277 A0A096LNT2 108 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 CLPSL1A2RUU4 121 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 TMEM189A5PLL7 270 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 SH2D1AO60880 128 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
GFAP-233ENST00000639277 HIF1ANQ9NWT6 349 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.74□□□□□ -0.37
GFAP-233ENST00000639277 IGHG4P01861 327 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 DMRTA1Q5VZB9 504 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 METTL26Q96S19 204 aa12.74□□□□□ -0.37
GFAP-233ENST00000639277 BMI1P35226 326 aa12.73□□□□□ -0.37
GFAP-233ENST00000639277 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
GFAP-233ENST00000639277 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
GFAP-233ENST00000639277 LCN12Q6JVE5 192 aa12.73□□□□□ -0.37
GFAP-233ENST00000639277 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 FAM181BA6NEQ2 426 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 RAB4AP20338 218 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 HLA-DMBP28068 263 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 TDRG1Q3Y452 100 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 CYB5R2Q6BCY4 276 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 URB1-AS1Q96HZ7 61 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 VGLL1Q99990 258 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 PAM16Q9Y3D7 125 aa12.72□□□□□ -0.37
GFAP-233ENST00000639277 SETD2Q9BYW2 2564 aaPredicted RBP12.72□□□□□ -0.37
GFAP-233ENST00000639277 IGF1P05019 195 aa12.71□□□□□ -0.37
GFAP-233ENST00000639277 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
GFAP-233ENST00000639277 C2orf88Q9BSF0 95 aa12.71□□□□□ -0.37
GFAP-233ENST00000639277 A6NDX4 124 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 M0QZK8 103 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 TRGV3P03979 118 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 SRSF2Q01130 221 aaKnown RBP12.71□□□□□ -0.38
GFAP-233ENST00000639277 LINC01356Q8N9X3 169 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 Q8TAT8 98 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 MIEN1Q9BRT3 115 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 TPPP3Q9BW30 176 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 U3KQE9 123 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 SVEP1Q4LDE5 3571 aa12.71□□□□□ -0.38
GFAP-233ENST00000639277 H3BUA1 57 aa12.7□□□□□ -0.38
GFAP-233ENST00000639277 BRI3O95415 125 aa12.7□□□□□ -0.38
GFAP-233ENST00000639277 AVPP01185 164 aa12.7□□□□□ -0.38
GFAP-233ENST00000639277 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
GFAP-233ENST00000639277 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
GFAP-233ENST00000639277 H3BUX3 64 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 IGHG2P01859 326 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 LINC00614P0C842 121 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 BTF3P20290 206 aaKnown RBP12.69□□□□□ -0.38
GFAP-233ENST00000639277 PMCHL1Q16048 86 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 LYZL1Q6UWQ5 148 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 MRPL53Q96EL3 112 aaKnown RBP12.69□□□□□ -0.38
GFAP-233ENST00000639277 LINC00527Q9UJ94 153 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 TMSB15BA0A087X1C1 80 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 IGHV3-66A0A0C4DH42 116 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 J3QLI3 93 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 LY6EQ16553 131 aa12.69□□□□□ -0.38
GFAP-233ENST00000639277 BEX4Q9NWD9 120 aaPredicted RBP12.69□□□□□ -0.38
GFAP-233ENST00000639277 NF1P21359 2839 aa12.68□□□□□ -0.38
GFAP-233ENST00000639277 C2orf70A6NJV1 201 aa12.68□□□□□ -0.38
GFAP-233ENST00000639277 ARL3P36405 182 aa12.68□□□□□ -0.38
GFAP-233ENST00000639277 CTRLP40313 264 aa12.68□□□□□ -0.38
GFAP-233ENST00000639277 LOXL1Q08397 574 aaPredicted RBP12.68□□□□□ -0.38
GFAP-233ENST00000639277 EBLN2Q6P2I7 272 aa12.68□□□□□ -0.38
GFAP-233ENST00000639277 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
GFAP-233ENST00000639277 TLN2Q9Y4G6 2542 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 IGHV1-24A0A0C4DH33 117 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 M0QZ24 198 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 ZNF207O43670 478 aaKnown RBP12.67□□□□□ -0.38
GFAP-233ENST00000639277 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
GFAP-233ENST00000639277 SPATA45Q537H7 98 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 ZNF705AQ6ZN79 300 aaPredicted RBP12.67□□□□□ -0.38
GFAP-233ENST00000639277 LRRC75A-AS1Q8N1F1 130 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 USMG5Q96IX5 58 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
GFAP-233ENST00000639277 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 PRAC2D3DTV9 90 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 M0R143 59 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 OR5AL1P0C617 328 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 PPIFP30405 207 aaKnown RBP12.66□□□□□ -0.38
GFAP-233ENST00000639277 ERCC8Q13216 396 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 FER1L6-AS1Q8NA97 138 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 EREGO14944 169 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 C8orf86Q6ZUL3 223 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 TMEM70Q9BUB7 260 aa12.66□□□□□ -0.38
GFAP-233ENST00000639277 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
GFAP-233ENST00000639277 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
GFAP-233ENST00000639277 NDUFA4O00483 81 aa12.65□□□□□ -0.38
GFAP-233ENST00000639277 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
GFAP-233ENST00000639277 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
GFAP-233ENST00000639277 CR1P17927 2039 aa12.65□□□□□ -0.39
GFAP-233ENST00000639277 TMEM213A2RRL7 107 aa12.64□□□□□ -0.39
GFAP-233ENST00000639277 LEPROTL1O95214 131 aa12.64□□□□□ -0.39
GFAP-233ENST00000639277 DEFB113Q30KQ7 82 aa12.64□□□□□ -0.39
GFAP-233ENST00000639277 FAM104BQ5XKR9 115 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms