RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 SPOCK3Q9BQ16 436 aa4.29□□□□□ -1.72
TCF4-288ENST00000637923 HELZP42694 1942 aaKnown RBP4.28□□□□□ -1.72
TCF4-288ENST00000637923 KIF26BQ2KJY2 2108 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 NPBQ8NG41 125 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 LYPD6BQ8NI32 183 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 OCC1Q8TAD7 63 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 RNF5Q99942 180 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.28□□□□□ -1.72
TCF4-288ENST00000637923 MMP23AO75900 390 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 HLA-DRB4P13762 266 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 SPRNQ5BIV9 151 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 C17orf82Q86X59 251 aaPredicted RBP4.28□□□□□ -1.72
TCF4-288ENST00000637923 RFNGQ9Y644 331 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 HLA-DRB4X5D2U9 266 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 ACACAQ13085 2346 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 SIPA1L1O43166 1804 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 A0A087WW49 117 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 TRAV12-1A0A0B4J245 112 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 A0A1B0GW15 77 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 DEFB125Q8N687 156 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 PRORYQ9H606 182 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 NPDC1Q9NQX5 325 aaPredicted RBP4.28□□□□□ -1.72
TCF4-288ENST00000637923 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 FREM3P0C091 2139 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 SPINK8P0C7L1 97 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 C11orf45Q8TAV5 145 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 ZNF503-AS2A6NEH8 195 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 LINC00587B1AMM8 73 aa4.28□□□□□ -1.72
TCF4-288ENST00000637923 IGHV7-4-1A0A0J9YVY3 117 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 CENPVL3A0A0U1RRI6 287 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 RHODO00212 210 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 CD5LO43866 347 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 IGFBP3P17936 291 aaPredicted RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 SMR3AQ99954 134 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 MRPL27Q9P0M9 148 aaKnown RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 IGKV2-29A2NJV5 120 aaPredicted RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 C19orf84I3L1E1 186 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 ELANEP08246 267 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 NTF4P34130 210 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 ATXN8Q156A1 80 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 GAGE2AQ6NT46 116 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 AMN1Q8IY45 258 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 LINC00479Q96M42 142 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 NAA38Q9BRA0 125 aaKnown RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 TP53TG1Q9Y2A0 90 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 KMT2EQ8IZD2 1858 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 LOXP28300 417 aaPredicted RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 Q6ZR03 302 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 LRRK1Q38SD2 2015 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 H3BUT2 72 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 NDUFA4O00483 81 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 CCL20P78556 96 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 VWA8A3KMH1 1905 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 I3L3M4 83 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 CAMK2N2Q96S95 79 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 IL17DQ8TAD2 202 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 IFI27L1Q96BM0 104 aa4.27□□□□□ -1.73
TCF4-288ENST00000637923 PNRC2Q9NPJ4 139 aaKnown RBP4.27□□□□□ -1.73
TCF4-288ENST00000637923 IGHV1-24A0A0C4DH33 117 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 GNRH2O43555 120 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 HLA-DMBP28068 263 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 C5orf38Q86SI9 138 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 LGALS1P09382 135 aaKnown RBP4.26□□□□□ -1.73
TCF4-288ENST00000637923 NLRC5Q86WI3 1866 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 CRYGCP07315 174 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 C10orf105Q8TEF2 133 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 SLX1AQ9BQ83 275 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 TMEM213A2RRL7 107 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 ATP5G1P05496 136 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 PLA2G2AP14555 144 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 LBHQ53QV2 105 aaPredicted RBP4.26□□□□□ -1.73
TCF4-288ENST00000637923 LY6G5BQ8NDX9 201 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 WIPF2Q8TF74 440 aaPredicted RBP4.26□□□□□ -1.73
TCF4-288ENST00000637923 WFDC1Q9HC57 220 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 ETDCA0A1B0GVM5 59 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 FAM90A9PA6NNJ1 464 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 A8MWV9 139 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 CTSGP08311 255 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 SEM1Q6ZVN7 128 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 PUSL1Q8N0Z8 303 aaKnown RBP4.26□□□□□ -1.73
TCF4-288ENST00000637923 RNASE2P10153 161 aaKnown RBP4.26□□□□□ -1.73
TCF4-288ENST00000637923 C17orf58Q2M2W7 97 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 AMTNQ6UX39 209 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 FAM186AA6NE01 2351 aa4.26□□□□□ -1.73
TCF4-288ENST00000637923 SEC11AP67812 179 aa4.25□□□□□ -1.73
TCF4-288ENST00000637923 PLEKHB2Q96CS7 222 aa4.25□□□□□ -1.73
TCF4-288ENST00000637923 RHOHQ15669 191 aa4.25□□□□□ -1.73
TCF4-288ENST00000637923 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
TCF4-288ENST00000637923 SMDT1Q9H4I9 107 aa4.25□□□□□ -1.73
TCF4-288ENST00000637923 MRPL23Q16540 153 aaKnown RBP4.25□□□□□ -1.73
TCF4-288ENST00000637923 MBD3L1Q8WWY6 194 aa4.25□□□□□ -1.73
TCF4-288ENST00000637923 AJUBAQ96IF1 538 aa4.25□□□□□ -1.73
TCF4-288ENST00000637923 A0A1W2PRE2 83 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms