RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 SMPXQ9UHP9 88 aa16.45■□□□□ 0.22
CHRNA7-228ENST00000637519 A0A1W2PS18 150 aa16.44■□□□□ 0.22
CHRNA7-228ENST00000637519 NPIPB6E9PJ23 425 aa16.44■□□□□ 0.22
CHRNA7-228ENST00000637519 KHDC1LQ5JSQ8 128 aa16.44■□□□□ 0.22
CHRNA7-228ENST00000637519 TMEM213A2RRL7 107 aa16.44■□□□□ 0.22
CHRNA7-228ENST00000637519 DUX3Q96PT4 197 aa16.44■□□□□ 0.22
CHRNA7-228ENST00000637519 MRPL18Q9H0U6 180 aaKnown RBP16.44■□□□□ 0.22
CHRNA7-228ENST00000637519 NAT8BQ9UHF3 227 aa16.44■□□□□ 0.22
CHRNA7-228ENST00000637519 SOCS3O14543 225 aa16.43■□□□□ 0.22
CHRNA7-228ENST00000637519 HOXD3P31249 432 aaPredicted RBP16.43■□□□□ 0.22
CHRNA7-228ENST00000637519 ZNF80P51504 273 aaPredicted RBP16.43■□□□□ 0.22
CHRNA7-228ENST00000637519 RAB4BP61018 213 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 ARL6IP6Q8N6S5 226 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 A0A1B0GUS0 222 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 IFITM10A6NMD0 228 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 CT45A10P0DMU9 189 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 TMEM136Q6ZRR5 245 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 C11orf44Q8N8P7 122 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 PGLYRP4Q96LB8 373 aa16.42■□□□□ 0.22
CHRNA7-228ENST00000637519 SH2D1AO60880 128 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 HOXA5P20719 270 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 MEOX2P50222 304 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 AGPAT4-IT1Q9H0P7 198 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 NRN1Q9NPD7 142 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 UFC1Q9Y3C8 167 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 TMSB15BA0A087X1C1 80 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 XKRY2A2RUG3 117 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 A8MWL6 223 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 K7EMT4 169 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 SLURP1P55000 103 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 CT83Q5H943 113 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 GDF5OSQ5U4N7 250 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 ZNF738Q8NE65 137 aa16.41■□□□□ 0.22
CHRNA7-228ENST00000637519 LY6G6DO95868 133 aa16.4■□□□□ 0.22
CHRNA7-228ENST00000637519 KIAA1644Q3SXP7 199 aa16.39■□□□□ 0.21
CHRNA7-228ENST00000637519 SAPCD1Q5SSQ6 148 aa16.39■□□□□ 0.21
CHRNA7-228ENST00000637519 GRIFINA4D1Z8 144 aa16.39■□□□□ 0.21
CHRNA7-228ENST00000637519 CAMPP49913 170 aa16.39■□□□□ 0.21
CHRNA7-228ENST00000637519 WFDC3Q8IUB2 231 aa16.39■□□□□ 0.21
CHRNA7-228ENST00000637519 GNB1LQ9BYB4 327 aa16.39■□□□□ 0.21
CHRNA7-228ENST00000637519 OR4B1Q8NGF8 309 aa16.38■□□□□ 0.21
CHRNA7-228ENST00000637519 F6UB75 175 aa16.38■□□□□ 0.21
CHRNA7-228ENST00000637519 FAM162BQ5T6X4 162 aa16.38■□□□□ 0.21
CHRNA7-228ENST00000637519 MRPL53Q96EL3 112 aaKnown RBP16.38■□□□□ 0.21
CHRNA7-228ENST00000637519 RBAKDNA6NC62 111 aa16.37■□□□□ 0.21
CHRNA7-228ENST00000637519 CDX1P47902 265 aaPredicted RBP16.37■□□□□ 0.21
CHRNA7-228ENST00000637519 TFPI2P48307 235 aa16.37■□□□□ 0.21
CHRNA7-228ENST00000637519 HIST3H2BBQ8N257 126 aa16.37■□□□□ 0.21
CHRNA7-228ENST00000637519 SSBP4Q9BWG4 385 aaPredicted RBP16.37■□□□□ 0.21
CHRNA7-228ENST00000637519 NDFIP1Q9BT67 221 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 TPPP3Q9BW30 176 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 HIVEP2P31629 2446 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 SLAQ13239 276 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 TMEM78Q5T7P6 136 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 COX8CQ7Z4L0 72 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 REC114Q7Z4M0 266 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 KLHL30-AS1Q8NEE0 82 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 OR11H1Q8NG94 326 aa16.36■□□□□ 0.21
CHRNA7-228ENST00000637519 FBLL1A6NHQ2 334 aaKnown RBP16.35■□□□□ 0.21
CHRNA7-228ENST00000637519 A8MWP6 167 aa16.35■□□□□ 0.21
CHRNA7-228ENST00000637519 WDR73Q6P4I2 378 aa16.35■□□□□ 0.21
CHRNA7-228ENST00000637519 Q6ZQT7 251 aa16.35■□□□□ 0.21
CHRNA7-228ENST00000637519 RBPMS2Q6ZRY4 209 aaKnown RBP16.35■□□□□ 0.21
CHRNA7-228ENST00000637519 A0A1B0GXF2 115 aa16.34■□□□□ 0.21
CHRNA7-228ENST00000637519 RNASE1P07998 156 aaKnown RBP16.34■□□□□ 0.21
CHRNA7-228ENST00000637519 ZNF138P52744 262 aa16.34■□□□□ 0.21
CHRNA7-228ENST00000637519 GFRA4Q9GZZ7 299 aa16.34■□□□□ 0.21
CHRNA7-228ENST00000637519 A0A1W2PRX2 142 aa16.34■□□□□ 0.21
CHRNA7-228ENST00000637519 DCANP1Q8TF63 244 aa16.34■□□□□ 0.21
CHRNA7-228ENST00000637519 C4orf3Q8WVX3 66 aa16.34■□□□□ 0.21
CHRNA7-228ENST00000637519 TMEM189A5PLL7 270 aa16.33■□□□□ 0.21
CHRNA7-228ENST00000637519 C2orf70A6NJV1 201 aa16.33■□□□□ 0.21
CHRNA7-228ENST00000637519 J3KRW8 73 aa16.33■□□□□ 0.21
CHRNA7-228ENST00000637519 SSTP61278 116 aa16.33■□□□□ 0.21
CHRNA7-228ENST00000637519 ADAMTSL5Q6ZMM2 481 aa16.33■□□□□ 0.21
CHRNA7-228ENST00000637519 C9orf47Q6ZRZ4 202 aa16.33■□□□□ 0.21
CHRNA7-228ENST00000637519 F2Z2F3 143 aa16.33■□□□□ 0.2
CHRNA7-228ENST00000637519 LGALS9O00182 355 aa16.33■□□□□ 0.2
CHRNA7-228ENST00000637519 HLA-DQA1P01909 254 aa16.33■□□□□ 0.2
CHRNA7-228ENST00000637519 KLF5Q13887 457 aaPredicted RBP16.33■□□□□ 0.2
CHRNA7-228ENST00000637519 WIPF2Q8TF74 440 aaPredicted RBP16.33■□□□□ 0.2
CHRNA7-228ENST00000637519 MUC21A0A0G2JKD1 596 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 MUC21A0A140T8X8 626 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 LINC01619G3V211 115 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 MT-ND6P03923 174 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 ARMS2P0C7Q2 107 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 SRSF2Q01130 221 aaKnown RBP16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 MUC21Q5SSG8 566 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 PRR9Q5T870 116 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 MS4A6AQ9H2W1 248 aa16.32■□□□□ 0.2
CHRNA7-228ENST00000637519 HAX1O00165 279 aa16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 CD28P10747 220 aa16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 HILS1P60008 231 aa16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 HBBP68871 147 aa16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 HIST1H1AQ02539 215 aaPredicted RBP16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 TMEM256Q8N2U0 113 aa16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 LINC01006Q8NI28 216 aa16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 ZNF418Q8TF45 676 aaPredicted RBP16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 TMEM160Q9NX00 188 aa16.31■□□□□ 0.2
CHRNA7-228ENST00000637519 SETD2Q9BYW2 2564 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms