RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SPATA25Q9BR10 227 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 SOX21Q9Y651 276 aaPredicted RBP9.05□□□□□ -0.96
CLN6-217ENST00000636964 ANKRD17O75179 2603 aaKnown RBP9.05□□□□□ -0.96
CLN6-217ENST00000636964 M0R2Z0 102 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 NPFFO15130 113 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 SPINK8P0C7L1 97 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 PATE2Q6UY27 113 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 ZNF503Q96F45 646 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 SMIM27A0A1W2PRY6 76 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 VWC2LB2RUY7 222 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 APCSP02743 223 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 CRYBB3P26998 211 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 UBE2G1P62253 170 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 ANXA2RQ3ZCQ2 193 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 CHD6Q8TD26 2715 aa9.04□□□□□ -0.96
CLN6-217ENST00000636964 TRAV40A0A0B4J280 105 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 OOSP1A8MZH6 123 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 FAM106CPP0CH98 169 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 GNG4P50150 75 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 KRTAP10-9P60411 292 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 PAX8Q06710 450 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 Q8N6K4 173 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 THAP8Q8NA92 274 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 MAPK1IP1LQ8NDC0 245 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 TXNDC17Q9BRA2 123 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 NAV2Q8IVL1 2488 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 A0A087WX48 190 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 PSMB11A5LHX3 300 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 C10orf113Q5VZT2 155 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 PVRIGQ6DKI7 326 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 FAM231BA6NCW3 169 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 I3L2K1 104 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 PYYP10082 97 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 SRSF2Q01130 221 aaKnown RBP9.03□□□□□ -0.96
CLN6-217ENST00000636964 ZNF355PQ9NSJ1 428 aa9.03□□□□□ -0.96
CLN6-217ENST00000636964 HLA-DQA1P01909 254 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 C8orf88P0DMB2 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 EBI3Q14213 229 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 UFSP1Q6NVU6 142 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 TMEM219Q86XT9 240 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 Q8N9W7 124 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 A0A087X0K7 114 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 OR4C46A6NHA9 309 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 IGHV4-38-2P0DP08 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 LINC00305Q7Z4B0 112 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 SLC25A2Q9BXI2 301 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 GAGE12JA6NER3 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 GAGE7O76087 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 IGHV3-23P01764 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 GAGE12FP0CL80 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 GAGE12GP0CL81 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 GAGE12IP0CL82 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 GAGE4Q13068 117 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 TIGITQ495A1 244 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 IGF2BP2-AS1Q96M15 143 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 JMJD8Q96S16 334 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 C7orf69Q9H7B7 122 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 OSTCQ9NRP0 149 aa9.02□□□□□ -0.97
CLN6-217ENST00000636964 IGHV7-81A0A0B4J1V7 117 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 K7EIM0 57 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 CD5LO43866 347 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 TAS2R45P59539 299 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 ATP5G2Q06055 141 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 FAM167A-AS1Q96KT0 104 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 MAP1LC3CQ9BXW4 147 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 LINC01548A6NM66 108 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 GGTLC3B5MD39 225 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 PRB4P10163 310 aaPredicted RBP9.01□□□□□ -0.97
CLN6-217ENST00000636964 SCRT2Q9NQ03 307 aa9.01□□□□□ -0.97
CLN6-217ENST00000636964 FASNP49327 2511 aaKnown RBP9.01□□□□□ -0.97
CLN6-217ENST00000636964 C7orf71A4D174 169 aa9□□□□□ -0.97
CLN6-217ENST00000636964 HSBP1O75506 76 aa9□□□□□ -0.97
CLN6-217ENST00000636964 UBE2L3P68036 154 aaKnown RBP9□□□□□ -0.97
CLN6-217ENST00000636964 KLF5Q13887 457 aaPredicted RBP9□□□□□ -0.97
CLN6-217ENST00000636964 OR1L4Q8NGR5 311 aa9□□□□□ -0.97
CLN6-217ENST00000636964 LINC00479Q96M42 142 aa9□□□□□ -0.97
CLN6-217ENST00000636964 TRGV9Q99603 122 aa9□□□□□ -0.97
CLN6-217ENST00000636964 RASL11BQ9BPW5 248 aa9□□□□□ -0.97
CLN6-217ENST00000636964 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
CLN6-217ENST00000636964 FABP5P3A8MUU1 101 aa9□□□□□ -0.97
CLN6-217ENST00000636964 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
CLN6-217ENST00000636964 IGHV1-69P01742 117 aa9□□□□□ -0.97
CLN6-217ENST00000636964 MSMBP08118 114 aa9□□□□□ -0.97
CLN6-217ENST00000636964 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
CLN6-217ENST00000636964 LYZP61626 148 aa9□□□□□ -0.97
CLN6-217ENST00000636964 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
CLN6-217ENST00000636964 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
CLN6-217ENST00000636964 OR2K2Q8NGT1 345 aa9□□□□□ -0.97
CLN6-217ENST00000636964 FANCD2OSQ96PS1 177 aa9□□□□□ -0.97
CLN6-217ENST00000636964 IZUMO1RA6ND01 250 aa9□□□□□ -0.97
CLN6-217ENST00000636964 ISLRO14498 428 aa9□□□□□ -0.97
CLN6-217ENST00000636964 ECSCRQ19T08 205 aa9□□□□□ -0.97
CLN6-217ENST00000636964 IBA57Q5T440 356 aaKnown RBP9□□□□□ -0.97
CLN6-217ENST00000636964 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
CLN6-217ENST00000636964 TMEM167BQ9NRX6 74 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms