RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 NDPQ00604 133 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 FAM19A2Q8N3H0 131 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 VWC2LB2RUY7 222 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 SIVA1O15304 175 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 OR8A1Q8NGG7 326 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 G3V318 75 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 FCN3O75636 299 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 IGLC3P0DOY3 106 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 VPREB3Q9UKI3 123 aa3.54□□□□□ -1.84
SCN1A-210ENST00000635776 CREBBPQ92793 2442 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 TMEM238LA0A1B0GVL6 79 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 A6NJY4 79 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 H0Y8G0 127 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 MRPS12O15235 138 aaKnown RBP3.53□□□□□ -1.84
SCN1A-210ENST00000635776 RNF224P0DH78 156 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 UQCRFS1P47985 274 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 FAM120AOSQ5T036 256 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 ASPHD1Q5U4P2 390 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 ZFHX2Q9C0A1 2572 aaPredicted RBP3.53□□□□□ -1.84
SCN1A-210ENST00000635776 J3QR89 54 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 PCP4P48539 62 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 BRD3OSQ6XYD6 125 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 AGPAT4-IT1Q9H0P7 198 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 ZFAND3Q9H8U3 227 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 F5H697 171 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 PRB3Q04118 309 aaPredicted RBP3.53□□□□□ -1.84
SCN1A-210ENST00000635776 ANKHD1Q8IWZ3 2542 aaKnown RBP3.53□□□□□ -1.84
SCN1A-210ENST00000635776 IGHV3-35A0A0C4DH35 117 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 NDUFS7O75251 213 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 LGALS1P09382 135 aaKnown RBP3.53□□□□□ -1.84
SCN1A-210ENST00000635776 LAGE3Q14657 143 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 VAMP3Q15836 100 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 TRAV2A0A0B4J234 112 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 A1L4Q6 167 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 CRXO43186 299 aaPredicted RBP3.53□□□□□ -1.84
SCN1A-210ENST00000635776 KHDC1LQ5JSQ8 128 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 GTSF1Q8WW33 167 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 CNFNQ9BYD5 112 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 MUC6Q6W4X9 2439 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 IGLC6P0CF74 106 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 OR2K2Q8NGT1 345 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 UBE2E2Q96LR5 201 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 U3KQE9 123 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 NUDT3O95989 172 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 ZNF418Q8TF45 676 aaPredicted RBP3.53□□□□□ -1.84
SCN1A-210ENST00000635776 IGHG4P01861 327 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 IL17RELQ6ZVW7 336 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 GLMPQ8WWB7 406 aa3.53□□□□□ -1.84
SCN1A-210ENST00000635776 IGHV1-24A0A0C4DH33 117 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 LGALS9O00182 355 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 DPM2O94777 84 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 IGLV2-11P01706 119 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 PLNP26678 52 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 TMEM219Q86XT9 240 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 SNHG12Q9BXW3 62 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 TNFRSF6BO95407 300 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 HSD52Q0P140 79 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 RUSC1-AS1Q66K80 236 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 PIP4P2Q8N4L2 257 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 TMEM208Q9BTX3 173 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 ZNF747Q9BV97 191 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 CYSLTR1Q9Y271 337 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV3OR16-10A0A075B7F0 116 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 OR11H12B2RN74 326 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 EGR2P11161 476 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-210ENST00000635776 DLX1P56177 255 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 DYNAPQ8N1N2 210 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 OR11H1Q8NG94 326 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 OR11H2Q8NH07 326 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV3-11P01762 117 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 VCYO14598 125 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 MGPP08493 103 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 ZNF25P17030 456 aaPredicted RBP3.52□□□□□ -1.85
SCN1A-210ENST00000635776 CCDC140Q96MF4 163 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 LOC389332A0A1B0GUA5 103 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 RHODO00212 210 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 DEFB113Q30KQ7 82 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 DUX5Q96PT3 197 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV4-4A0A075B6R2 117 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 ZNF207O43670 478 aaKnown RBP3.52□□□□□ -1.85
SCN1A-210ENST00000635776 PTTG1IPP53801 180 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 MRPL51Q4U2R6 128 aaKnown RBP3.52□□□□□ -1.85
SCN1A-210ENST00000635776 LINC01545Q5VT33 79 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 U3KQK5 164 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 IGHV4-30-2A0A087WSY4 118 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 FOXI2Q6ZQN5 318 aa3.52□□□□□ -1.85
SCN1A-210ENST00000635776 IGKCP01834 107 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 Q8TAT8 98 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 COPS9Q8WXC6 57 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 C17orf77Q96MU5 243 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 C8orf49Q96NF6 230 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 MALRD1Q5VYJ5 2156 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 TRAV25A0A0B4J276 109 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 DLEU1O43261 78 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 TMEM141Q96I45 108 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 RCHY1Q96PM5 261 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 VGLL1Q99990 258 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 TAL2Q16559 108 aa3.51□□□□□ -1.85
SCN1A-210ENST00000635776 LDLRAD2Q5SZI1 272 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 326.8 ms