RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 RAB24Q969Q5 203 aa10.68□□□□□ -0.7
HSPG2-214ENST00000635682 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
HSPG2-214ENST00000635682 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
HSPG2-214ENST00000635682 NIPSNAP3BQ9BS92 247 aa10.68□□□□□ -0.7
HSPG2-214ENST00000635682 OTORQ9NRC9 128 aa10.68□□□□□ -0.7
HSPG2-214ENST00000635682 TMEM167BQ9NRX6 74 aa10.68□□□□□ -0.7
HSPG2-214ENST00000635682 C11orf94C9JXX5 98 aa10.67□□□□□ -0.7
HSPG2-214ENST00000635682 K7EQM0 130 aa10.67□□□□□ -0.7
HSPG2-214ENST00000635682 RBMY1A1P0DJD3 496 aaKnown RBP10.67□□□□□ -0.7
HSPG2-214ENST00000635682 RBMY1CP0DJD4 496 aa10.67□□□□□ -0.7
HSPG2-214ENST00000635682 RBMY1FQ15415 496 aaKnown RBP10.67□□□□□ -0.7
HSPG2-214ENST00000635682 AKAP14Q86UN6 197 aa10.67□□□□□ -0.7
HSPG2-214ENST00000635682 STOML3Q8TAV4 291 aa10.67□□□□□ -0.7
HSPG2-214ENST00000635682 PHLDA1Q8WV24 401 aaPredicted RBP10.67□□□□□ -0.7
HSPG2-214ENST00000635682 IGKV2-40A0A087WW87 121 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-214ENST00000635682 CTXND1A0A1B0GTU2 59 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 PGPA6NDG6 321 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 G3V3Q6 166 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 H7BYZ3 331 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 BCL2L11O43521 198 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 EIF3GO75821 320 aaKnown RBP eCLIP10.66□□□□□ -0.7
HSPG2-214ENST00000635682 IGKV2D-40P01614 121 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-214ENST00000635682 GPX1P07203 203 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 STAG3L3P0CL85 134 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 TAS2R60P59551 318 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 ERCC8Q13216 396 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 Q6ZNX1 250 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 C1orf158Q8N1D5 194 aa10.66□□□□□ -0.7
HSPG2-214ENST00000635682 RBAKDNA6NC62 111 aa10.65□□□□□ -0.7
HSPG2-214ENST00000635682 SLC25A5P05141 298 aaKnown RBP10.65□□□□□ -0.7
HSPG2-214ENST00000635682 CT45A10P0DMU9 189 aa10.65□□□□□ -0.7
HSPG2-214ENST00000635682 GCHFRP30047 84 aa10.65□□□□□ -0.7
HSPG2-214ENST00000635682 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
HSPG2-214ENST00000635682 TRAV10A0A0B4J240 114 aa10.64□□□□□ -0.71
HSPG2-214ENST00000635682 ZNF705GA8MUZ8 300 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-214ENST00000635682 CRXO43186 299 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-214ENST00000635682 TPT1P13693 172 aaKnown RBP10.64□□□□□ -0.71
HSPG2-214ENST00000635682 ZNF138P52744 262 aa10.64□□□□□ -0.71
HSPG2-214ENST00000635682 EIF5AL1Q6IS14 154 aaKnown RBP10.64□□□□□ -0.71
HSPG2-214ENST00000635682 C9orf47Q6ZRZ4 202 aa10.64□□□□□ -0.71
HSPG2-214ENST00000635682 TCTE3Q8IZS6 198 aa10.64□□□□□ -0.71
HSPG2-214ENST00000635682 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
HSPG2-214ENST00000635682 NDFIP1Q9BT67 221 aa10.64□□□□□ -0.71
HSPG2-214ENST00000635682 AGPAT4-IT1Q9H0P7 198 aa10.64□□□□□ -0.71
HSPG2-214ENST00000635682 YTHDF2Q9Y5A9 579 aaKnown RBP10.64□□□□□ -0.71
HSPG2-214ENST00000635682 DNAH10Q8IVF4 4471 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 TRAV12-3A0A0B4J271 114 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 C7orf71A4D174 169 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
HSPG2-214ENST00000635682 GFI1BQ5VTD9 330 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 TMUB2Q71RG4 321 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 OR11H4Q8NGC9 324 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 C2CD4CQ8TF44 421 aa10.63□□□□□ -0.71
HSPG2-214ENST00000635682 UMAD1C9J7I0 102 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 DIRC3C9JPN6 131 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 RGS13O14921 159 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 NMBP08949 121 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 SEC11BP0C7V7 166 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 DAD1P61803 113 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 ZNF493Q6ZR52 646 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 GOLT1AQ6ZVE7 132 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 ARL6IP6Q8N6S5 226 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 ST6GAL2Q96JF0 529 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 VGLL1Q99990 258 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 PYGO2Q9BRQ0 406 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 CYTL1Q9NRR1 136 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 ZNF492Q9P255 531 aa10.62□□□□□ -0.71
HSPG2-214ENST00000635682 MAP1LC3B2A6NCE7 125 aa10.61□□□□□ -0.71
HSPG2-214ENST00000635682 SNURFLB1AK76 121 aa10.61□□□□□ -0.71
HSPG2-214ENST00000635682 IFNA7P01567 189 aa10.61□□□□□ -0.71
HSPG2-214ENST00000635682 FAM213BQ8TBF2 198 aa10.61□□□□□ -0.71
HSPG2-214ENST00000635682 NKX6-2Q9C056 277 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-214ENST00000635682 MAP1LC3BQ9GZQ8 125 aa10.61□□□□□ -0.71
HSPG2-214ENST00000635682 TRBV7-9A0A0J9YWB2 115 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 CBY3A6NI87 242 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 LYRM9A8MSI8 78 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 C1QBP02746 253 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
HSPG2-214ENST00000635682 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 DPPA3Q6W0C5 159 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 Q6ZTC4 211 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 ZNF767PQ75MW2 155 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 Q8TAT8 98 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 TMEM263Q8WUH6 116 aaKnown RBP10.6□□□□□ -0.71
HSPG2-214ENST00000635682 DKK2Q9UBU2 259 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 CELA1Q9UNI1 258 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-214ENST00000635682 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
HSPG2-214ENST00000635682 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
HSPG2-214ENST00000635682 IGLL5B9A064 214 aa10.59□□□□□ -0.71
HSPG2-214ENST00000635682 TEX46H3BTG2 121 aa10.59□□□□□ -0.71
HSPG2-214ENST00000635682 HTN3P15516 51 aa10.59□□□□□ -0.71
HSPG2-214ENST00000635682 CRISP2P16562 243 aa10.59□□□□□ -0.71
HSPG2-214ENST00000635682 PPT1P50897 306 aa10.59□□□□□ -0.71
HSPG2-214ENST00000635682 FGF8P55075 233 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-214ENST00000635682 UBE2G2P60604 165 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms