RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SYCNQ0VAF6 134 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 USF2Q15853 346 aaPredicted RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 TNXAQ16473 311 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 VMA21Q3ZAQ7 101 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 HSD17B12Q53GQ0 312 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 MPV17L2Q567V2 206 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 RBM48Q5RL73 367 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 OGFRL1Q5TC84 451 aaPredicted RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 CLEC19AQ6UXS0 136 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 AHSA2Q719I0 299 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 SLC7A5P1Q8MH63 180 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 FAM24BQ8N5W8 94 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 CYB561D1Q8N8Q1 229 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 OR1S1Q8NH92 325 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 VSTM2AQ8TAG5 236 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 RXFP4Q8TDU9 374 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 DYNLRB2Q8TF09 96 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 CYGBQ8WWM9 190 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 ACOT12Q8WYK0 555 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 MAFIPQ8WZ33 124 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 NARS2Q96I59 477 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 KCNS1Q96KK3 526 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 OR2A7Q96R45 310 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 S100A13Q99584 98 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 CMSS1Q9BQ75 279 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 NDFIP1Q9BT67 221 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 MND1Q9BWT6 205 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 SCRT1Q9BWW7 348 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 OR51E2Q9H255 320 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 DUSP21Q9H596 190 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 VSIRQ9H7M9 311 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 C8orf4Q9NR00 106 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 NDUFA4L2Q9NRX3 87 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF355PQ9NSJ1 428 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 TMEM14BQ9NUH8 114 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 PLEKHJ1Q9NW61 149 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 NDUFB11Q9NX14 153 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 MRPL27Q9P0M9 148 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 VAX2Q9UIW0 290 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 RAB26Q9ULW5 256 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 KLK5Q9Y337 293 aaPredicted RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 ORC6Q9Y5N6 252 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 LRP2P98164 4655 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 TNXBP22105 4242 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAV3A0A0B4J244 114 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAV8-4A0A0B4J246 113 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 TMEM223A0PJW6 202 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 TMEM235A6NFC5 223 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 A8MTW9 85 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF705GA8MUZ8 300 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF705FA8MVS1 300 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 NDUFC2-KCTD14E9PQ53 114 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 I3L2K1 104 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 K7EN84 100 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 MYL12BO14950 172 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 SNAI2O43623 268 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 P01737 135 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 HLA-DQA1P01909 254 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 REG1AP05451 166 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 CTSGP08311 255 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF688P0C7X2 276 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF705DP0CH99 300 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF705BP0CI00 300 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 CD36P16671 472 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 NFYAP23511 347 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 CRHBPP24387 322 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 PSMA1P25786 263 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 MAP2K4P45985 399 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 OR10A3P58181 314 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 TAS2R31P59538 309 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 MLLT11Q13015 90 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 LGALS9BQ3B8N2 356 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 BSXQ3C1V8 233 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 HACD4Q5VWC8 232 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 Q5W150 140 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 THOC7Q6I9Y2 204 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 MORN3Q6PF18 240 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 ZFP2Q6ZN57 461 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 OR11H2Q8NH07 326 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 OR4A5Q8NH83 315 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 OR10J5Q8NHC4 309 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 DCANP1Q8TF63 244 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 DGCR14Q96DF8 476 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 C18orf15Q96N68 181 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 PHB2Q99623 299 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 RSG1Q9BU20 258 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 NXF2Q9GZY0 626 aaKnown RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 FXYD6Q9H0Q3 95 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 DCSTAMPQ9H295 470 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 TREM1Q9NP99 234 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 C8orf17Q9NRJ1 99 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 COMMD9Q9P000 198 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 SMPXQ9UHP9 88 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 ANXA10Q9UJ72 324 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 RAB22AQ9UL26 194 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 UFC1Q9Y3C8 167 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 S4R3C0 116 aa1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 FLG2Q5D862 2391 aaPredicted RBP1.51□□□□□ -2.17
SMARCB1-208ENST00000634926 IGHV3OR16-8A0A075B7F1 116 aa1.5□□□□□ -2.17
SMARCB1-208ENST00000634926 IGHV7-4-1A0A0J9YVY3 117 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms