RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 PRAC2D3DTV9 90 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 GOSR1O95249 250 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 NPYP01303 97 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 HBDP02042 147 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 CKS2P33552 79 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 SAA4P35542 130 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 LMO4P61968 165 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 ECSCRQ19T08 205 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 DEFB125Q8N687 156 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 IGHV3OR16-8A0A075B7F1 116 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 IGHV3-35A0A0C4DH35 117 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 MUC21A0A0G2JKD1 596 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 CENPVL3A0A0U1RRI6 287 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 MUC21A0A140T8X8 626 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 PPBPP02775 128 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 MUC21Q5SSG8 566 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 MRPL53Q96EL3 112 aaKnown RBP9.85□□□□□ -0.83
LINC00540-203ENST00000631321 IGF2RP11717 2491 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 ERCC8Q13216 396 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 C2orf91Q6ZV80 131 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 OR8A1Q8NGG7 326 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 OR1N2Q8NGR9 330 aa9.85□□□□□ -0.83
LINC00540-203ENST00000631321 ORM1P02763 201 aa9.84□□□□□ -0.83
LINC00540-203ENST00000631321 FGF6P10767 208 aa9.84□□□□□ -0.83
LINC00540-203ENST00000631321 TRBV7-1A0A0A6YYK4 115 aa9.84□□□□□ -0.83
LINC00540-203ENST00000631321 SMKR1H3BMG3 65 aa9.84□□□□□ -0.83
LINC00540-203ENST00000631321 EEF1AKMT3Q96AZ1 226 aa9.84□□□□□ -0.83
LINC00540-203ENST00000631321 ATP6V0BQ99437 205 aa9.84□□□□□ -0.83
LINC00540-203ENST00000631321 U3KQE9 123 aa9.84□□□□□ -0.83
LINC00540-203ENST00000631321 NBASA2RRP1 2371 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 UBTD1Q9HAC8 227 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 TRAV8-2A0A0B4J237 113 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 G3V318 75 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 NPFFO15130 113 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 ANKRD39Q53RE8 183 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 CLEC19AQ6UXS0 136 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 IL17RELQ6ZVW7 336 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 RNF182Q8N6D2 247 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 C5orf56Q8N8D9 126 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 IFI27L1Q96BM0 104 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 HIF1ANQ9NWT6 349 aa9.83□□□□□ -0.84
LINC00540-203ENST00000631321 LINC01548A6NM66 108 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 CD5LO43866 347 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 BPESC1Q9GZL8 116 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 AGPAT4-IT1Q9H0P7 198 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 MAP1LC3AQ9H492 121 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 ATRXP46100 2492 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 CACNG7P62955 275 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 C19orf54Q5BKX5 351 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 PRSS57Q6UWY2 283 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 METTL26Q96S19 204 aa9.82□□□□□ -0.84
LINC00540-203ENST00000631321 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
LINC00540-203ENST00000631321 K7EP13 123 aa9.81□□□□□ -0.84
LINC00540-203ENST00000631321 CRIP2P52943 208 aaPredicted RBP9.81□□□□□ -0.84
LINC00540-203ENST00000631321 NHLH1Q02575 133 aa9.81□□□□□ -0.84
LINC00540-203ENST00000631321 FOXE3Q13461 319 aa9.81□□□□□ -0.84
LINC00540-203ENST00000631321 BOD1L2Q8IYS8 172 aa9.81□□□□□ -0.84
LINC00540-203ENST00000631321 NXT2Q9NPJ8 142 aaKnown RBP9.81□□□□□ -0.84
LINC00540-203ENST00000631321 C11orf21Q9P2W6 132 aa9.81□□□□□ -0.84
LINC00540-203ENST00000631321 WNK2Q9Y3S1 2297 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 IGHV3-66A0A0C4DH42 116 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 FXYD7P58549 80 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 C9orf47Q6ZRZ4 202 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 C8orf86Q6ZUL3 223 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 TNFRSF6BO95407 300 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 SFTPCP11686 197 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 SEC11AP67812 179 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 ATP5G2Q06055 141 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 VAMP3Q15836 100 aa9.8□□□□□ -0.84
LINC00540-203ENST00000631321 CSMD1Q96PZ7 3565 aa9.79□□□□□ -0.84
LINC00540-203ENST00000631321 GAS8-AS1O95177 125 aa9.79□□□□□ -0.84
LINC00540-203ENST00000631321 FCER1GP30273 86 aa9.79□□□□□ -0.84
LINC00540-203ENST00000631321 TMEM97Q5BJF2 176 aa9.79□□□□□ -0.84
LINC00540-203ENST00000631321 TMEM78Q5T7P6 136 aa9.79□□□□□ -0.84
LINC00540-203ENST00000631321 PIFOQ8TCI5 191 aa9.79□□□□□ -0.84
LINC00540-203ENST00000631321 FAM223BA6NKX1 122 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 SIVA1O15304 175 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 PSMG4Q5JS54 123 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 FAM223AQ8IWN6 122 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 OR9G4Q8NGQ1 327 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 ITLN2Q8WWU7 325 aaPredicted RBP9.78□□□□□ -0.84
LINC00540-203ENST00000631321 MOB4Q9Y3A3 225 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 CBY1Q9Y3M2 126 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 IGHV4-4A0A075B6R2 117 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 IGHV7-4-1A0A0J9YVY3 117 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 PRSS47A8MTI9 375 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 SMAD7O15105 426 aaKnown RBP9.78□□□□□ -0.84
LINC00540-203ENST00000631321 MED13LQ71F56 2210 aa9.78□□□□□ -0.84
LINC00540-203ENST00000631321 IGLV2-18A0A075B6J9 118 aa9.77□□□□□ -0.84
LINC00540-203ENST00000631321 IGHV3OR16-13A0A075B7E8 117 aa9.77□□□□□ -0.84
LINC00540-203ENST00000631321 IGHV3-74A0A0B4J1X5 117 aa9.77□□□□□ -0.84
LINC00540-203ENST00000631321 TRAV41A0A0B4J266 112 aa9.77□□□□□ -0.84
LINC00540-203ENST00000631321 PPIFP30405 207 aaKnown RBP9.77□□□□□ -0.84
LINC00540-203ENST00000631321 OR4C5Q8NGB2 326 aa9.77□□□□□ -0.84
LINC00540-203ENST00000631321 GLMPQ8WWB7 406 aa9.77□□□□□ -0.84
LINC00540-203ENST00000631321 ZMAT4Q9H898 229 aa9.77□□□□□ -0.84
LINC00540-203ENST00000631321 LEPP41159 167 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms