RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 A0A0J9YX75 114 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 H3BMM0 161 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 IFNA1P01562 189 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 CCL20P78556 96 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 ZNF506Q5JVG8 444 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 AAMDCQ9H7C9 122 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 CSMD3Q7Z407 3707 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 HLA-DRB4P13762 266 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
PNKP-224ENST00000631020 RAB5BP61020 215 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 TRPT1Q86TN4 253 aaKnown RBP13.69□□□□□ -0.22
PNKP-224ENST00000631020 PRELID1Q9Y255 219 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 YTHDF2Q9Y5A9 579 aaKnown RBP13.69□□□□□ -0.22
PNKP-224ENST00000631020 HLA-DRB4X5D2U9 266 aa13.69□□□□□ -0.22
PNKP-224ENST00000631020 PGPA6NDG6 321 aa13.68□□□□□ -0.22
PNKP-224ENST00000631020 RNF212Q495C1 297 aa13.68□□□□□ -0.22
PNKP-224ENST00000631020 STHQ8IWL8 128 aa13.68□□□□□ -0.22
PNKP-224ENST00000631020 OR8A1Q8NGG7 326 aa13.68□□□□□ -0.22
PNKP-224ENST00000631020 MRPL53Q96EL3 112 aaKnown RBP13.68□□□□□ -0.22
PNKP-224ENST00000631020 BIN3Q9NQY0 253 aa13.68□□□□□ -0.22
PNKP-224ENST00000631020 OTORQ9NRC9 128 aa13.68□□□□□ -0.22
PNKP-224ENST00000631020 RYR3Q15413 4870 aa13.67□□□□□ -0.22
PNKP-224ENST00000631020 UBE2G2P60604 165 aa13.67□□□□□ -0.22
PNKP-224ENST00000631020 EBLN2Q6P2I7 272 aa13.67□□□□□ -0.22
PNKP-224ENST00000631020 LOC102724200A0A096LPH7 203 aaPredicted RBP13.66□□□□□ -0.22
PNKP-224ENST00000631020 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
PNKP-224ENST00000631020 C7orf77A4D0Y5 90 aa13.66□□□□□ -0.22
PNKP-224ENST00000631020 GGTLC3B5MD39 225 aa13.66□□□□□ -0.22
PNKP-224ENST00000631020 IGKV3-20P01619 116 aa13.66□□□□□ -0.22
PNKP-224ENST00000631020 MT-ND4LP03901 98 aa13.66□□□□□ -0.22
PNKP-224ENST00000631020 RXFP4Q8TDU9 374 aa13.66□□□□□ -0.22
PNKP-224ENST00000631020 C1orf196B1AJZ1 125 aa13.65□□□□□ -0.22
PNKP-224ENST00000631020 TAGLN2P37802 199 aaKnown RBP13.65□□□□□ -0.22
PNKP-224ENST00000631020 CNN1P51911 297 aaKnown RBP13.65□□□□□ -0.22
PNKP-224ENST00000631020 SUMO1P63165 101 aaKnown RBP13.65□□□□□ -0.22
PNKP-224ENST00000631020 OR4B1Q8NGF8 309 aa13.65□□□□□ -0.22
PNKP-224ENST00000631020 A8MTW9 85 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 SRP19P09132 144 aaKnown RBP13.64□□□□□ -0.23
PNKP-224ENST00000631020 HIST1H1AQ02539 215 aaPredicted RBP13.64□□□□□ -0.23
PNKP-224ENST00000631020 CLUHP3Q96NS8 147 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 IGKV2-40A0A087WW87 121 aaPredicted RBP13.64□□□□□ -0.23
PNKP-224ENST00000631020 LOC102723971A0A1B0GUV8 181 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 COLCA2A8K830 154 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 PAGE4O60829 102 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 IGKV2D-40P01614 121 aaPredicted RBP13.64□□□□□ -0.23
PNKP-224ENST00000631020 GIG44P09565 113 aaPredicted RBP13.64□□□□□ -0.23
PNKP-224ENST00000631020 AMTNQ6UX39 209 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 RARRES2Q99969 163 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 NIPSNAP3BQ9BS92 247 aa13.64□□□□□ -0.23
PNKP-224ENST00000631020 DIRC3C9JPN6 131 aa13.63□□□□□ -0.23
PNKP-224ENST00000631020 DUSP14O95147 198 aaKnown RBP13.63□□□□□ -0.23
PNKP-224ENST00000631020 SLC25A5P05141 298 aaKnown RBP13.63□□□□□ -0.23
PNKP-224ENST00000631020 GNG5P63218 68 aa13.63□□□□□ -0.23
PNKP-224ENST00000631020 ERCC8Q13216 396 aa13.63□□□□□ -0.23
PNKP-224ENST00000631020 CSTL1Q9H114 145 aa13.63□□□□□ -0.23
PNKP-224ENST00000631020 A0A087WWC5 75 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 KIR2DL5BA0A0G2JN68 375 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 KIR2DL5BA0A0G2JPC4 375 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 B4DEV8 164 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 NPIPB6E9PJ23 425 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 NDUFS6O75380 124 aaKnown RBP13.62□□□□□ -0.23
PNKP-224ENST00000631020 CSN1S1P47710 185 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 PMS2P11Q13670 270 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 KIR2DL5AQ8N109 375 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 OR10J6PQ8NGY7 276 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 KIR2DL5BQ8NHK3 375 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 IL17DQ8TAD2 202 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 CMTM2Q8TAZ6 248 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 TVP23CQ96ET8 276 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 VGLL1Q99990 258 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 AGPAT4-IT1Q9H0P7 198 aa13.62□□□□□ -0.23
PNKP-224ENST00000631020 BCL2P10415 239 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 PNRC1Q12796 327 aaPredicted RBP13.61□□□□□ -0.23
PNKP-224ENST00000631020 CST9LP1Q5W188 147 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 ARL6IP6Q8N6S5 226 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 C5orf17Q8NAS9 161 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 HIST1H2BAQ96A08 127 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 RETNQ9HD89 108 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 GNG13Q9P2W3 67 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 EPDR1Q9UM22 224 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 RPH3ALQ9UNE2 315 aa13.61□□□□□ -0.23
PNKP-224ENST00000631020 CT45A10P0DMU9 189 aa13.6□□□□□ -0.23
PNKP-224ENST00000631020 ATP5G3P48201 142 aa13.6□□□□□ -0.23
PNKP-224ENST00000631020 APOC4P55056 127 aa13.6□□□□□ -0.23
PNKP-224ENST00000631020 FXYD7P58549 80 aa13.6□□□□□ -0.23
PNKP-224ENST00000631020 C9orf47Q6ZRZ4 202 aa13.6□□□□□ -0.23
PNKP-224ENST00000631020 ARL2-SNX15V9GYD0 113 aa13.6□□□□□ -0.23
PNKP-224ENST00000631020 DYNC2H1Q8NCM8 4307 aaKnown RBP13.6□□□□□ -0.23
PNKP-224ENST00000631020 TENM2Q9NT68 2774 aa13.6□□□□□ -0.23
PNKP-224ENST00000631020 TCRAP04437 139 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 MORN3Q6PF18 240 aaPredicted RBP13.59□□□□□ -0.23
PNKP-224ENST00000631020 GOLT1AQ6ZVE7 132 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 LYSTQ99698 3801 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 VAX2Q9UIW0 290 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 STARD9Q9P2P6 4700 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 RBAKDNA6NC62 111 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 CXorf65A6NEN9 183 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 CEBPGP53567 150 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 LINC00477Q96M19 166 aa13.59□□□□□ -0.23
PNKP-224ENST00000631020 MANBALQ9NQG1 85 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms