RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-269	ENST00000630224	CEBPG	P53567	150 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	PAFAH1B2	P68402	229 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	SOHLH1	Q5JUK2	328 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	ADAMTSL5	Q6ZMM2	481 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	TCF24	Q7RTU0	167 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	C5orf17	Q8NAS9	161 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	CMTM2	Q8TAZ6	248 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	RPUSD4	Q96CM3	377 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	PRR25	Q96S07	402 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	SLC50A1	Q9BRV3	221 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	MLST8	Q9BVC4	326 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	NRN1	Q9NPD7	142 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	ZNF586	Q9NXT0	402 aa		4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.64	□□□□□ -1.67
TCF4-269	ENST00000630224	TMEM218	A2RU14	115 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	PGP	A6NDG6	321 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	KRBOX1	C9JBD0	128 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224		K7EQM0	130 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	DNASE2	O00115	360 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	CSN3	P07498	182 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	SNRPC	P09234	159 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	SFTA3	P0C7M3	94 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	S100A1	P23297	94 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	ATP5G3	P48201	142 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	CD81	P60033	236 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	EGFEM1P	Q0D2K5	195 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	ARL6IP6	Q8N6S5	226 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	CYB561D1	Q8N8Q1	229 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	HIST1H2BA	Q96A08	127 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224		Q9H3A6	140 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	SIGLEC8	Q9NYZ4	499 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	PRELID1	Q9Y255	219 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	SMAD5-AS1	Q9Y6J3	95 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	STARD9	Q9P2P6	4700 aa		4.63	□□□□□ -1.67
TCF4-269	ENST00000630224	TRAV25	A0A0B4J276	109 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	SERTM2	A0A1B0GWG4	89 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	GGTLC3	B5MD39	225 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224		F8W036	122 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	PEX7	O00628	323 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	ISLR	O14498	428 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	ATP6V1G1	O75348	118 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	SAP30	O75446	220 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	NDUFB4	O95168	129 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	S100A9	P06702	114 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	SRP19	P09132	144 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	AKR1C3	P42330	323 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	CNN1	P51911	297 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	SNRPD3	P62318	126 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	FAM74A3	Q4VXF1	159 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	CCDC28A	Q8IWP9	274 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	C11orf52	Q96A22	123 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	MRPL53	Q96EL3	112 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	C17orf77	Q96MU5	243 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	SMIM7	Q9BQ49	75 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	ATG101	Q9BSB4	218 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	MCRIP2	Q9BUT9	160 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	MLX	Q9UH92	298 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	EPDR1	Q9UM22	224 aa		4.62	□□□□□ -1.67
TCF4-269	ENST00000630224	IGKV3-7	A0A075B6H7	116 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	TRAV2	A0A0B4J234	112 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	OR4C46	A6NHA9	309 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	FBLL1	A6NHQ2	334 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	ZNF727	A8MUV8	499 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224		C9JQL5	133 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	SLC17A3	O00476	420 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	TSPAN4	O14817	238 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	TCRA	P04437	139 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	INSL3	P51460	131 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	UBE2G1	P62253	170 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	PSG3	Q16557	428 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	ZNF674	Q2M3X9	581 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	DEFB114	Q30KQ6	69 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	FAM90A2P	Q658T7	463 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	LCN12	Q6JVE5	192 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	EXOC3-AS1	Q8N2X6	119 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	GBGT1	Q8N5D6	347 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	ZNF738	Q8NE65	137 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	OR2K2	Q8NGT1	345 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	LINC00052	Q96N35	136 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	RCHY1	Q96PM5	261 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	SPAG8	Q99932	426 aa	Predicted RBP	4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	NIPSNAP3B	Q9BS92	247 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	SEC11C	Q9BY50	192 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	MS4A6A	Q9H2W1	248 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	RPH3AL	Q9UNE2	315 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	HERC2	O95714	4834 aa		4.61	□□□□□ -1.67
TCF4-269	ENST00000630224	PLEC	Q15149	4684 aa	Known RBP	4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	PCLO	Q9Y6V0	5065 aa		4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	TRAV8-2	A0A0B4J237	113 aa		4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	APOC3	P02656	99 aa		4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	EDN2	P20800	178 aa		4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	RPL35	P42766	123 aa	Known RBP	4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	TFPI2	P48307	235 aa		4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	GNG4	P50150	75 aa		4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	CMC4	P56277	68 aa	Predicted RBP	4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	TAS2R60	P59551	318 aa		4.6	□□□□□ -1.67
TCF4-269	ENST00000630224	GNG5	P63218	68 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms