RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 SPINK13Q1W4C9 94 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 PQLC2Q6ZP29 291 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 TMUB2Q71RG4 321 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 BAP18Q8IXM2 172 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 Q8NAQ8 132 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 RAB24Q969Q5 203 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 MRPL53Q96EL3 112 aaKnown RBP4.02□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF471Q9BX82 626 aaPredicted RBP4.02□□□□□ -1.77
LINC00550-202ENST00000629570 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 AAMDCQ9H7C9 122 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 X6R8D5 127 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 DNAH7Q8WXX0 4024 aa4.02□□□□□ -1.77
LINC00550-202ENST00000629570 IGHV3OR16-12A0A075B7B8 117 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 IGHV4-28A0A0C4DH34 117 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF705EA8MWA4 302 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 BOLA2-SMG1P6H3BVE0 249 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 CRXO43186 299 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 PFDN1O60925 122 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 MBP02144 154 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 RBMY1A1P0DJD3 496 aaKnown RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 RBMY1CP0DJD4 496 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 GCHFRP30047 84 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 FGF8P55075 233 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 ERCC8Q13216 396 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 RBMY1FQ15415 496 aaKnown RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 LGALSLQ3ZCW2 172 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 AKR1C8PQ5T2L2 129 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF705AQ6ZN79 300 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 C1orf158Q8N1D5 194 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 OR10J6PQ8NGY7 276 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 Q8TAT8 98 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 MUC7Q8TAX7 377 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 TMED6Q8WW62 240 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 HYLS1Q96M11 299 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 C1QTNF4Q9BXJ3 329 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 ACTR3CQ9C0K3 210 aaPredicted RBP4.01□□□□□ -1.77
LINC00550-202ENST00000629570 Q9H3A6 140 aa4.01□□□□□ -1.77
LINC00550-202ENST00000629570 TENM2Q9NT68 2774 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 STARD9Q9P2P6 4700 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 CTXND1A0A1B0GTU2 59 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 MAP1LC3B2A6NCE7 125 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 GGTLC3B5MD39 225 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 J3KRW8 73 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 CXorf1O96002 111 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 INSP01308 110 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 PRM2P04554 102 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 SEC11BP0C7V7 166 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 CT45A10P0DMU9 189 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 TPT1P13693 172 aaKnown RBP4□□□□□ -1.77
LINC00550-202ENST00000629570 CDKN1BP46527 198 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 NKX2-5P52952 324 aaPredicted RBP4□□□□□ -1.77
LINC00550-202ENST00000629570 GNG5P63218 68 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 ZFP69Q49AA0 526 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 GFI1BQ5VTD9 330 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 ZFAND6Q6FIF0 208 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 IQCF2Q8IXL9 164 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 C9orf62Q8N4C0 152 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 STOML3Q8TAV4 291 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 IGF2BP2-AS1Q96M15 143 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 C8orf49Q96NF6 230 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 VGLL1Q99990 258 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 MAP1LC3BQ9GZQ8 125 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 AGPAT4-IT1Q9H0P7 198 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 C11orf68Q9H3H3 251 aaKnown RBP4□□□□□ -1.77
LINC00550-202ENST00000629570 OTORQ9NRC9 128 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 PPP1R14DQ9NXH3 145 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 RPH3ALQ9UNE2 315 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 PRELID1Q9Y255 219 aa4□□□□□ -1.77
LINC00550-202ENST00000629570 A0A1B0GV50 99 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 PGPA6NDG6 321 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 DIRC3C9JPN6 131 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 AMBPP02760 352 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 MIFP14174 115 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 CSN1S1P47710 185 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 EMP1P54849 157 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 UBE2G2P60604 165 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 PMS2P11Q13670 270 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 PRR9Q5T870 116 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 C9orf47Q6ZRZ4 202 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 GOLT1AQ6ZVE7 132 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 LYPD1Q8N2G4 141 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 IL17DQ8TAD2 202 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 FAM213BQ8TBF2 198 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 SUN5Q8TC36 379 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 FAM19A4Q96LR4 140 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 ODF3Q96PU9 254 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 TMEM208Q9BTX3 173 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 CELA1Q9UNI1 258 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 GOLT1BQ9Y3E0 138 aa3.99□□□□□ -1.77
LINC00550-202ENST00000629570 YTHDF2Q9Y5A9 579 aaKnown RBP3.99□□□□□ -1.77
LINC00550-202ENST00000629570 KMT2CQ8NEZ4 4911 aaKnown RBP3.99□□□□□ -1.77
LINC00550-202ENST00000629570 TRAV8-1A0A0A6YYK1 113 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 TRAV12-3A0A0B4J271 114 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 CXorf65A6NEN9 183 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 ZNF705GA8MUZ8 300 aaPredicted RBP3.98□□□□□ -1.77
LINC00550-202ENST00000629570 KLLNB2CW77 178 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 UMAD1C9J7I0 102 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 C3orf84H3BNL1 204 aa3.98□□□□□ -1.77
LINC00550-202ENST00000629570 HBE1P02100 147 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms