RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 LGI3Q8N145 548 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 LINC00337Q8N6G1 96 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 CYB561D1Q8N8Q1 229 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 MRGPRFQ96AM1 343 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 CENPNQ96H22 339 aaPredicted RBP3.43□□□□□ -1.86
LINC00649-220ENST00000628906 FAM19A4Q96LR4 140 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 ARPC5LQ9BPX5 153 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 RRP15Q9Y3B9 282 aaKnown RBP3.43□□□□□ -1.86
LINC00649-220ENST00000628906 FBLL1A6NHQ2 334 aaKnown RBP3.42□□□□□ -1.86
LINC00649-220ENST00000628906 HMGB1P1B2RPK0 211 aaPredicted RBP3.42□□□□□ -1.86
LINC00649-220ENST00000628906 ANKRD65E5RJM6 399 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 SSX5O60225 188 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 CIDEAO60543 219 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 LINC00694P0DN24 101 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 RPL7P18124 248 aaKnown RBP3.42□□□□□ -1.86
LINC00649-220ENST00000628906 RNASE4P34096 147 aaKnown RBP3.42□□□□□ -1.86
LINC00649-220ENST00000628906 RAB31Q13636 194 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 SS18Q15532 418 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 LINC00173Q6ZV60 143 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 BEST4Q8NFU0 473 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 LRRC20Q8TCA0 184 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 NUDCD2Q8WVJ2 157 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 ATP6V1G3Q96LB4 118 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 C9orf85Q96MD7 179 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 TRGV9Q99603 122 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 PDCD10Q9BUL8 212 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 ZNF331Q9NQX6 463 aaPredicted RBP3.42□□□□□ -1.86
LINC00649-220ENST00000628906 Q9UF83 564 aa3.42□□□□□ -1.86
LINC00649-220ENST00000628906 METTL21EPA6NDL7 271 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 ZNF253O75346 499 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 IGKV1-5P01602 117 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 CRPP02741 224 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 NMBP08949 121 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 HOXB5P09067 269 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 UCHL1P09936 223 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 S100A7P31151 101 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 RPS10P46783 165 aaKnown RBP3.41□□□□□ -1.86
LINC00649-220ENST00000628906 TAS2R20P59543 309 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 SPCS3P61009 180 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 RAP2BP61225 183 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 AARDQ4LEZ3 155 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 GGNBP1Q5YKI7 109 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 DHRS11Q6UWP2 260 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 HEYLQ9NQ87 328 aaPredicted RBP3.41□□□□□ -1.86
LINC00649-220ENST00000628906 DIABLOQ9NR28 239 aa3.41□□□□□ -1.86
LINC00649-220ENST00000628906 AK6Q9Y3D8 172 aaKnown RBP3.41□□□□□ -1.86
LINC00649-220ENST00000628906 hCG_2014768A0A024R1R8 64 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 H3BRN7 92 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 GPR31O00270 319 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 MRPS12O15235 138 aaKnown RBP3.4□□□□□ -1.87
LINC00649-220ENST00000628906 CRISP2P16562 243 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 CXCL2P19875 107 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 HLA-DMAP28067 261 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 GPX4P36969 197 aaPredicted RBP3.4□□□□□ -1.87
LINC00649-220ENST00000628906 NHLH2Q02577 135 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 NMSQ5H8A3 153 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 DHRSXQ8N5I4 330 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 PRR34Q9NV39 138 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 RAB21Q9UL25 225 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 SSR3Q9UNL2 185 aa3.4□□□□□ -1.87
LINC00649-220ENST00000628906 DIMT1Q9UNQ2 313 aaKnown RBP3.4□□□□□ -1.87
LINC00649-220ENST00000628906 TCRBV3S1A0A5B6 114 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 B5MCH6 92 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 GABARAPH6UMI1 98 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 M0R2P5 195 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 EI24O14681 340 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 GABARAPO95166 117 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 GPX1P07203 203 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 MYL12AP19105 171 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 ORM2P19652 201 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 INPP1P49441 399 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 CTAG1AP78358 180 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 KCNIP4Q6PIL6 250 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 LCN15Q6UWW0 184 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 HOGA1Q86XE5 327 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 C15orf54Q8N8G6 183 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 LINC00477Q96M19 166 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 SLC50A1Q9BRV3 221 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 SHANK2-AS3Q9BTD1 123 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 TMEM147Q9BVK8 224 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 GFRA4Q9GZZ7 299 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 C20orf85Q9H1P6 137 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 PLCXD1Q9NUJ7 323 aa3.39□□□□□ -1.87
LINC00649-220ENST00000628906 GAGE12JA6NER3 117 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 PMS2P5A8MQ11 134 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 OR4E1P0C645 316 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 HSMCR30P0CW71 290 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 MGST1P10620 155 aaKnown RBP3.38□□□□□ -1.87
LINC00649-220ENST00000628906 GNG2P59768 71 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 UBE2MP61081 183 aaKnown RBP3.38□□□□□ -1.87
LINC00649-220ENST00000628906 HERV-K104P61576 105 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 CYCSP99999 105 aaKnown RBP3.38□□□□□ -1.87
LINC00649-220ENST00000628906 GAGE1Q13065 139 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 GAGE4Q13068 117 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 GAGE5Q13069 117 aa3.38□□□□□ -1.87
LINC00649-220ENST00000628906 BAK1Q16611 211 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms