RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 MORN4Q8NDC4 146 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 ZNF555Q8NEP9 628 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 STAG3L4Q8TBR4 150 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 C10orf105Q8TEF2 133 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 LSM10Q969L4 123 aaKnown RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 C16orf74Q96GX8 76 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 IMMP1LQ96LU5 166 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 DSCR8Q96T75 97 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 AMELYQ99218 206 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 FXYD6Q9H0Q3 95 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 LSM2Q9Y333 95 aaKnown RBP2.03□□□□□ -2.08
CNOT1-223ENST00000628857 PTPRDP23468 1912 aa2.03□□□□□ -2.08
CNOT1-223ENST00000628857 NYNRINQ9P2P1 1898 aaKnown RBP2.03□□□□□ -2.09
CNOT1-223ENST00000628857 CLTCQ00610 1675 aaKnown RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 ADGRB1O14514 1584 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 COL1A1P02452 1464 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 C1orf167Q5SNV9 1468 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 ZFC3H1O60293 1989 aaKnown RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 ARHGAP21Q5T5U3 1957 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 IGKV1D-43A0A0B4J1Z2 117 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 IGKV1-8A0A0C4DH67 115 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 A0A0G2JND7 137 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 TRBV7-7A0A0K0K1E9 115 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 PINLYPA6NC86 204 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 OR1I1O60431 355 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 CREBL2O60519 120 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 IGLV3-27P01718 113 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 IGKCP01834 107 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 HBDP02042 147 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 PRB2P02812 416 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 HLA-DPB1P04440 258 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 IL5P05113 134 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 AQP1P29972 269 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 DAPP51397 102 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 DYNLT3P51808 116 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF138P52744 262 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 SYNJ2BPP57105 145 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 GNB2P62879 340 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF322Q6U7Q0 402 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 PCP2Q8IVA1 136 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 SIGLECL1Q8N7X8 197 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 C15orf53Q8NAA6 179 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 C18orf32Q8TCD1 76 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF714Q96N38 554 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 MGST2Q99735 147 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 POLR2J2Q9GZM3 115 aaKnown RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 Q9H3A6 140 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 EPDR1Q9UM22 224 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 KLK5Q9Y337 293 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 DNAJC15Q9Y5T4 150 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 OBSL1O75147 1896 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 TSPOAP1O95153 1857 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 ANKRD36CQ5JPF3 1778 aa2.02□□□□□ -2.09
CNOT1-223ENST00000628857 CEP170BQ9Y4F5 1589 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-223ENST00000628857 PTPRBP23467 1997 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 CRYBG1Q9Y4K1 1723 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.01□□□□□ -2.09
CNOT1-223ENST00000628857 UBE2L5PA0A1B0GUS4 154 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 SNRPGP15A8MWD9 76 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 INS-IGF2F8WCM5 200 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 BUB1B-PAK6H3BSN5 160 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 SDCBPO00560 298 aaPredicted RBP2.01□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF737O75373 536 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 TCL1BO95988 128 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 IGLL1P15814 213 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF136P52737 540 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 KRTAP10-8P60410 259 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 UBE2L3P68036 154 aaKnown RBP2.01□□□□□ -2.09
CNOT1-223ENST00000628857 FUT5Q11128 374 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 WFDC2Q14508 124 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 KIAA0087Q14695 138 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 MIC13Q5XKP0 118 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 GUSBP11Q6P575 273 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 TMEM136Q6ZRR5 245 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 C7orf65Q6ZTY9 151 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 PHF5AQ7RTV0 110 aaKnown RBP2.01□□□□□ -2.09
CNOT1-223ENST00000628857 COMMD6Q7Z4G1 85 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 HMGN2P46Q86SG4 172 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 MED12LQ86YW9 2145 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 DEFB107AQ8IZN7 70 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 LINC01555Q8NAE3 123 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 MYOZ3Q8TDC0 251 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 CHAC1Q9BUX1 264 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 ZNF286AQ9HBT8 521 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 USP54Q70EL1 1684 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 CASP8AP2Q9UKL3 1982 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 NWD1Q149M9 1564 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 MROH2BQ7Z745 1585 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 NUP98P52948 1817 aa2.01□□□□□ -2.09
CNOT1-223ENST00000628857 CRB1P82279 1406 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 C10orf71Q711Q0 1435 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 MAST2Q6P0Q8 1798 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 NUMA1Q14980 2115 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 COL5A3P25940 1745 aaPredicted RBP2□□□□□ -2.09
CNOT1-223ENST00000628857 TANC2Q9HCD6 1990 aa2□□□□□ -2.09
CNOT1-223ENST00000628857 EIF2AK4Q9P2K8 1649 aaKnown RBP2□□□□□ -2.09
CNOT1-223ENST00000628857 TRAV2A0A0B4J234 112 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms